Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC178Q5BJE1 MIR3199-2-201ENST00000636243 86 ntBASIC3.49□□□□□ -1.85
CCDC178Q5BJE1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC178Q5BJE1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC178Q5BJE1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 AC092435.3-201ENST00000565538 3654 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 SNORA9.2-201ENST00000365361 133 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 SNORD14.1-201ENST00000365609 90 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 MIR128-1-201ENST00000384921 82 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 UBA52P6-201ENST00000399822 382 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 BPY2DP-201ENST00000422208 265 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 U8.20-201ENST00000459445 131 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 Y_RNA.721-201ENST00000517207 102 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 AC144568.1-201ENST00000520139 137 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 7SK.7-201ENST00000603504 247 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 AC087588.2-201ENST00000617667 426 ntBASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CCDC178Q5BJE1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 Y_RNA.47-201ENST00000362697 108 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 Y_RNA.149-201ENST00000363558 117 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 MIR568-201ENST00000385036 95 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 MIR548F4-201ENST00000408515 105 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC243964.1-201ENST00000441814 261 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 HMGN2P10-201ENST00000448085 265 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC112492.4-201ENST00000456549 352 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 RPL22P13-201ENST00000493291 347 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 MRPS36P4-201ENST00000534436 298 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC021739.1-201ENST00000559631 174 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC024581.2-201ENST00000619986 252 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC178Q5BJE1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.46□□□□□ -1.85
CCDC178Q5BJE1 AC233981.2-201ENST00000611524 1614 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.176-201ENST00000363815 109 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 RNU6-784P-201ENST00000384330 106 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 SNORA44-201ENST00000384584 132 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 MIR544A-201ENST00000384855 91 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 SNORA69.1-201ENST00000390904 137 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 Z92545.1-201ENST00000411782 234 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AP000275.1-201ENST00000411943 390 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 MTCYBP9-201ENST00000431021 303 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 MTCO3P8-201ENST00000453691 755 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC010099.1-201ENST00000455434 375 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 MRPS35P2-201ENST00000508242 191 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC091874.1-201ENST00000511402 339 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC040926.1-201ENST00000530195 238 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC006199.1-201ENST00000548728 219 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 MIR4503-201ENST00000582187 83 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC019159.1-201ENST00000605094 187 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AL138825.1-201ENST00000618587 192 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.86
CCDC178Q5BJE1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 RNU6-968P-201ENST00000384076 107 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 RNU6-198P-201ENST00000384258 104 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 SNORA51.11-201ENST00000384442 131 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 SNORA26.7-201ENST00000391288 122 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 RNU2-49P-201ENST00000410666 184 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 AC074117.2-201ENST00000417130 397 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 AL353705.4-201ENST00000449661 238 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 TOMM22P6-201ENST00000465035 409 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MED28P2-201ENST00000475771 317 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 MTCO2P24-201ENST00000515611 426 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 RNU6-475P-201ENST00000516073 104 ntBASIC3.45□□□□□ -1.86
CCDC178Q5BJE1 AC131281.1-201ENST00000522984 164 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms