Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL161798.1-201ENST00000604630 131 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL158042.1-201ENST00000605338 460 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC072039.2-201ENST00000608883 439 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL355816.2-201ENST00000610049 647 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC008759.3-201ENST00000613300 508 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MIR8065-201ENST00000620577 100 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-1010P-201ENST00000362757 107 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU5B-1-201ENST00000363286 116 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-414P-201ENST00000363705 104 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 Y_RNA.324-201ENST00000365165 102 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 SNORA40.2-201ENST00000390847 128 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-1176P-201ENST00000390955 107 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL117342.1-201ENST00000404861 406 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MIR1305-201ENST00000408300 86 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 MTCO2P5-201ENST00000422621 426 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 C1DP1-201ENST00000426049 402 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 GXYLT1P1-201ENST00000446657 490 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 SEPT14P24-201ENST00000447236 180 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL157398.1-201ENST00000452981 186 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MTND2P24-201ENST00000453434 806 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC145146.1-201ENST00000496370 254 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 RN7SKP256-201ENST00000517201 314 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 LRRC6P1-201ENST00000532188 885 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AP003034.1-201ENST00000534621 422 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC007834.2-201ENST00000536310 343 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AK6P2-201ENST00000549020 471 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC087897.1-201ENST00000550134 156 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MRPS36P5-201ENST00000551909 298 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 HMGB1P33-201ENST00000563485 527 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MTCYBP33-201ENST00000575007 1130 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 BNIP3P16-201ENST00000589779 534 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 MIR15A-201ENST00000607334 83 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC103706.2-201ENST00000638080 240 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 Y_RNA.332-201ENST00000365271 113 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 SNORA25B-201ENST00000365507 128 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 Y_RNA.534-201ENST00000384599 112 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 SNORA26.3-201ENST00000391119 136 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 Y_RNA.597-201ENST00000410463 100 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 PIGFP2-201ENST00000421400 651 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL355994.1-201ENST00000424379 260 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 SKA2P1-201ENST00000425592 390 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL593851.1-201ENST00000426171 157 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 HMGN2P34-201ENST00000437647 269 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL008629.1-201ENST00000438615 184 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC087477.1-201ENST00000465747 340 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC104692.1-201ENST00000472406 90 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 MTCYBP43-201ENST00000513621 740 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 RNU6-914P-201ENST00000516749 109 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 DEFB108A-201ENST00000530110 222 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 NACAP3-201ENST00000552100 481 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 TMF1P1-201ENST00000576058 373 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC091152.3-201ENST00000604227 325 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC090578.1-201ENST00000604955 591 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 MIR3976-201ENST00000606807 139 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL357075.2-201ENST00000614906 189 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 U6.99-201ENST00000637524 83 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL589826.1-201ENST00000340697 249 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 RNU6-512P-201ENST00000364438 103 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CACNA1EQ15878 Y_RNA.465-201ENST00000384293 102 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 MIR1468-201ENST00000410600 86 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 USP9YP11-201ENST00000427537 717 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 RPL23AP30-201ENST00000432419 501 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 MTND4P15-201ENST00000437913 1033 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 RPS15AP9-201ENST00000439856 381 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 MTCO2P25-201ENST00000447065 681 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AP001324.2-201ENST00000461163 319 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms