Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SNORD114-16-201ENST00000363044 70 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 RNU6-969P-201ENST00000383900 105 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 RNU2-23P-201ENST00000410545 195 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 SEPT7P5-201ENST00000434048 306 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 SEPT7P4-201ENST00000437076 306 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AC093534.1-201ENST00000504977 132 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AL162730.1-201ENST00000605734 292 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC021506.2-201ENST00000612354 169 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AL591926.4-201ENST00000616895 298 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC079416.3-201ENST00000624479 549 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 MIR140-201ENST00000385282 100 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AL357139.1-201ENST00000407792 426 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC068533.2-201ENST00000411872 306 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.09□□□□□ -2.42
PRKDCP78527 RPL18AP17-201ENST00000455326 198 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 U7.7-201ENST00000459276 60 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 RPL26P26-201ENST00000480251 434 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 HMGB1P29-201ENST00000505659 499 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 SNORA25.11-201ENST00000515935 105 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AC015688.6-201ENST00000577737 104 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AL353778.1-201ENST00000603149 408 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC010615.1-201ENST00000594254 1764 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 AC114482.1-201ENST00000418010 247 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 MTCO2P12-201ENST00000427426 682 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 AL096829.2-201ENST00000446582 742 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 MTND1P3-201ENST00000484956 952 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 SUMO2P18-201ENST00000518873 252 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.1□□□□□ -2.42
PRKDCP78527 AC005261.5-201ENST00000596280 355 ntBASIC-0.1□□□□□ -2.42
PRKDCP78527 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.1□□□□□ -2.43
PRKDCP78527 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.1□□□□□ -2.43
PRKDCP78527 MTND4P20-201ENST00000424125 869 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.1□□□□□ -2.43
PRKDCP78527 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.1□□□□□ -2.43
PRKDCP78527 RPS27AP8-201ENST00000452665 445 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 ELOCP24-201ENST00000456370 334 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 RNU7-21P-201ENST00000459430 62 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.1□□□□□ -2.43
PRKDCP78527 AC025459.1-201ENST00000504072 156 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.1□□□□□ -2.43
PRKDCP78527 SUMO2P16-201ENST00000519475 264 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 SNORD39.3-201ENST00000584451 71 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AL590229.1-201ENST00000603497 542 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AC091805.2-201ENST00000603848 235 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AC107952.2-201ENST00000606048 486 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AL603758.1-201ENST00000618654 241 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 U6.107-201ENST00000637108 79 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 CASC19-280ENST00000642102 1351 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 MIR302D-201ENST00000362275 68 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 RNU6-743P-201ENST00000364151 106 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 RNU6-754P-201ENST00000391166 107 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 RAP1BP3-201ENST00000407180 549 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 ELOCP9-201ENST00000418624 239 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.1□□□□□ -2.43
PRKDCP78527 AC093259.1-201ENST00000509755 300 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 AC007751.1-201ENST00000529260 376 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 LINC02555-201ENST00000563933 1951 ntBASIC-0.1□□□□□ -2.43
PRKDCP78527 RNU4-79P-201ENST00000362764 141 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RNU6-46P-201ENST00000383860 107 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AF228730.1-201ENST00000397972 663 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 CALM2P3-201ENST00000400429 449 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 MIR1262-201ENST00000408276 93 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 SNORA68.3-201ENST00000515906 83 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 SNORA31.2-201ENST00000516019 134 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 SNORA77B-201ENST00000578179 125 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 PART1_2.1-201ENST00000612397 250 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.11□□□□□ -2.43
PRKDCP78527 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.11□□□□□ -2.43
PRKDCP78527 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 U8.21-201ENST00000459536 136 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AL157786.1-207ENST00000627771 695 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 U6.99-201ENST00000637524 83 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 MIR520A-201ENST00000384862 85 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RPS3AP1-201ENST00000413190 320 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AL008629.1-201ENST00000438615 184 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AL031313.1-201ENST00000448435 256 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RNU6-333P-201ENST00000459117 107 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC097473.1-201ENST00000508142 408 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms