Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.78□□□□□ -2.28
TPM4P67936 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
TPM4P67936 RNU6-527P-201ENST00000363425 104 ntBASIC0.77□□□□□ -2.29
TPM4P67936 SNORD31B-201ENST00000364977 69 ntBASIC0.77□□□□□ -2.29
TPM4P67936 RNA5SP259-201ENST00000365541 109 ntBASIC0.77□□□□□ -2.29
TPM4P67936 RNU6-1080P-201ENST00000383982 107 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AL353777.1-201ENST00000425552 326 ntBASIC0.77□□□□□ -2.29
TPM4P67936 USP9YP14-201ENST00000430663 563 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AC073910.1-201ENST00000445047 438 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AC016925.1-201ENST00000458303 298 ntBASIC0.77□□□□□ -2.29
TPM4P67936 RNU7-51P-201ENST00000516560 62 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.77□□□□□ -2.29
TPM4P67936 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.77□□□□□ -2.29
TPM4P67936 AC107934.1-201ENST00000522215 217 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AP002453.2-201ENST00000533503 320 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.77□□□□□ -2.29
TPM4P67936 AC109446.1-201ENST00000566172 220 ntBASIC0.77□□□□□ -2.29
TPM4P67936 MIR4709-201ENST00000577272 72 ntBASIC0.77□□□□□ -2.29
TPM4P67936 MTCO2P2-201ENST00000591258 225 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AP002360.4-201ENST00000606980 481 ntBASIC0.77□□□□□ -2.29
TPM4P67936 AC099786.3-201ENST00000565735 1410 ntBASIC0.76□□□□□ -2.29
TPM4P67936 Y_RNA.110-201ENST00000363220 99 ntBASIC0.76□□□□□ -2.29
TPM4P67936 MIR23A-201ENST00000385245 73 ntBASIC0.76□□□□□ -2.29
TPM4P67936 AC114482.1-201ENST00000418010 247 ntBASIC0.76□□□□□ -2.29
TPM4P67936 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.76□□□□□ -2.29
TPM4P67936 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.76□□□□□ -2.29
TPM4P67936 AC010531.2-201ENST00000465012 153 ntBASIC0.76□□□□□ -2.29
TPM4P67936 RNU6-113P-201ENST00000516653 101 ntBASIC0.76□□□□□ -2.29
TPM4P67936 RNU6-201P-201ENST00000517100 61 ntBASIC0.76□□□□□ -2.29
TPM4P67936 AC136628.3-201ENST00000521868 290 ntBASIC0.76□□□□□ -2.29
TPM4P67936 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TPM4P67936 AC004817.2-201ENST00000561794 651 ntBASIC0.76□□□□□ -2.29
TPM4P67936 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.76□□□□□ -2.29
TPM4P67936 AC008752.3-201ENST00000588113 712 ntBASIC0.76□□□□□ -2.29
TPM4P67936 AC012507.3-201ENST00000603556 477 ntBASIC0.76□□□□□ -2.29
TPM4P67936 PART1_2.1-201ENST00000612397 250 ntBASIC0.76□□□□□ -2.29
TPM4P67936 AC097372.5-201ENST00000623665 376 ntBASIC0.76□□□□□ -2.29
TPM4P67936 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TPM4P67936 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.75□□□□□ -2.29
TPM4P67936 RNU6-1123P-201ENST00000362347 106 ntBASIC0.75□□□□□ -2.29
TPM4P67936 SNORD114-24-201ENST00000365029 72 ntBASIC0.75□□□□□ -2.29
TPM4P67936 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
TPM4P67936 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.75□□□□□ -2.29
TPM4P67936 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC007395.1-201ENST00000451333 677 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.75□□□□□ -2.29
TPM4P67936 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.75□□□□□ -2.29
TPM4P67936 AL049829.1-201ENST00000465411 156 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC117454.1-201ENST00000491120 168 ntBASIC0.75□□□□□ -2.29
TPM4P67936 RNU6-123P-201ENST00000516163 102 ntBASIC0.75□□□□□ -2.29
TPM4P67936 RNU6-1003P-201ENST00000517099 105 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC087883.1-201ENST00000551882 391 ntBASIC0.75□□□□□ -2.29
TPM4P67936 SNORA59B-202ENST00000578183 701 ntBASIC0.75□□□□□ -2.29
TPM4P67936 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
TPM4P67936 HMGN1P30-201ENST00000589286 268 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AL606834.3-201ENST00000602615 496 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AP000942.3-201ENST00000603702 160 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC105129.3-201ENST00000605455 485 ntBASIC0.75□□□□□ -2.29
TPM4P67936 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.75□□□□□ -2.29
TPM4P67936 AC073343.1-201ENST00000328239 651 ntBASIC0.74□□□□□ -2.29
TPM4P67936 SNORA4.2-201ENST00000365313 147 ntBASIC0.74□□□□□ -2.29
TPM4P67936 SNORD116.1-201ENST00000365628 92 ntBASIC0.74□□□□□ -2.29
TPM4P67936 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
TPM4P67936 CYCSP33-201ENST00000414485 327 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.74□□□□□ -2.29
TPM4P67936 GTF2IP13-201ENST00000438487 386 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AC092473.1-201ENST00000441098 221 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.74□□□□□ -2.29
TPM4P67936 PDCD5P2-201ENST00000507570 312 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.74□□□□□ -2.29
TPM4P67936 AC074344.1-201ENST00000512823 224 ntBASIC0.74□□□□□ -2.29
TPM4P67936 RNU6-1041P-201ENST00000516254 102 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AC010376.1-201ENST00000522101 334 ntBASIC0.74□□□□□ -2.29
TPM4P67936 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.74□□□□□ -2.29
TPM4P67936 MIR4307-201ENST00000582802 84 ntBASIC0.74□□□□□ -2.29
TPM4P67936 U4.7-201ENST00000638126 106 ntBASIC0.74□□□□□ -2.29
TPM4P67936 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.74□□□□□ -2.29
TPM4P67936 RNU6-105P-201ENST00000363909 104 ntBASIC0.73□□□□□ -2.29
TPM4P67936 RNA5SP99-201ENST00000364020 114 ntBASIC0.73□□□□□ -2.29
TPM4P67936 RNU6-371P-201ENST00000364283 108 ntBASIC0.73□□□□□ -2.29
TPM4P67936 SNORA18.2-201ENST00000383865 132 ntBASIC0.73□□□□□ -2.29
TPM4P67936 RPS20P2-201ENST00000402520 389 ntBASIC0.73□□□□□ -2.29
TPM4P67936 RNA5SP201-201ENST00000410316 124 ntBASIC0.73□□□□□ -2.29
TPM4P67936 EEF1A1P40-201ENST00000412883 573 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.73□□□□□ -2.29
TPM4P67936 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.73□□□□□ -2.29
TPM4P67936 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.73□□□□□ -2.29
TPM4P67936 MTND1P12-201ENST00000455231 147 ntBASIC0.73□□□□□ -2.29
TPM4P67936 RNU7-14P-201ENST00000459331 62 ntBASIC0.73□□□□□ -2.29
TPM4P67936 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
TPM4P67936 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.73□□□□□ -2.29
TPM4P67936 RNU6-1098P-201ENST00000516772 96 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.73□□□□□ -2.29
TPM4P67936 MIR5697-201ENST00000578045 78 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AL592221.1-201ENST00000605266 382 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AL139286.2-201ENST00000606838 396 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AL139022.2-201ENST00000606934 443 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AL353149.1-201ENST00000610667 244 ntBASIC0.73□□□□□ -2.29
TPM4P67936 AC008147.4-201ENST00000617570 1204 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms