Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL356292.1-201ENST00000283110 373 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 SNORD114-1-201ENST00000362705 72 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 RNU6-1120P-201ENST00000362988 108 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.51□□□□□ -2.17
CX3CR1P49238 RNU6-1103P-201ENST00000384150 107 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 RNU6-393P-201ENST00000384475 107 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 SNORA40.18-201ENST00000391200 128 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CR1P49238 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC243964.1-201ENST00000441814 261 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC091133.4-201ENST00000511142 308 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 RNU5F-2P-201ENST00000516066 82 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.51□□□□□ -2.17
CX3CR1P49238 AC022418.1-201ENST00000624118 445 ntBASIC1.51□□□□□ -2.17
CX3CR1P49238 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CX3CR1P49238 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CR1P49238 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU6-336P-201ENST00000364891 107 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CX3CR1P49238 SNORD116-9-201ENST00000384000 95 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 SNORD116-3-201ENST00000384287 95 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU6-1119P-201ENST00000384349 108 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 SNORD116-7-201ENST00000384404 95 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 SNORD116-5-201ENST00000384462 95 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU6-692P-201ENST00000384496 107 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU6-1222P-201ENST00000384615 107 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RPS20P15-201ENST00000412792 311 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CR1P49238 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.5□□□□□ -2.17
CX3CR1P49238 USP9YP14-201ENST00000430663 563 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 PRPS1P1-201ENST00000445305 876 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC073415.1-201ENST00000449240 153 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AL356010.1-201ENST00000456364 102 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU7-180P-201ENST00000459240 63 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RPL23AP63-201ENST00000498752 471 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC108078.1-201ENST00000508073 725 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CX3CR1P49238 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC023050.3-201ENST00000541142 333 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 HIF1AP1-201ENST00000553642 175 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 HSBP1P1-201ENST00000555205 166 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC104581.2-201ENST00000572227 430 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC025754.2-201ENST00000606491 432 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC008536.2-201ENST00000607284 349 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 AC009318.2-201ENST00000610917 651 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CX3CR1P49238 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
CX3CR1P49238 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.5□□□□□ -2.17
CX3CR1P49238 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
CX3CR1P49238 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CX3CR1P49238 Y_RNA.51-201ENST00000362725 102 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 RNY3P9-201ENST00000384727 106 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.49□□□□□ -2.17
CX3CR1P49238 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CX3CR1P49238 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.49□□□□□ -2.17
CX3CR1P49238 RPL32P28-201ENST00000443577 397 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.49□□□□□ -2.17
CX3CR1P49238 AC013470.1-201ENST00000453438 462 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 GMFBP1-201ENST00000467831 427 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC008834.1-201ENST00000511612 175 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 MIR449C-201ENST00000516047 92 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 RNVU1-2-201ENST00000516326 135 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CX3CR1P49238 MTND2P38-201ENST00000522536 667 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC022880.1-201ENST00000534017 973 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 MIR3611-201ENST00000584484 83 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC068790.2-201ENST00000602601 557 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 AC068792.1-201ENST00000621354 417 ntBASIC1.49□□□□□ -2.17
CX3CR1P49238 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CX3CR1P49238 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CX3CR1P49238 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CX3CR1P49238 RNU6-23P-201ENST00000363283 107 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 RNU6-1285P-201ENST00000363480 105 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 RNA5SP493-201ENST00000364115 91 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 RNU6-266P-201ENST00000364225 107 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CX3CR1P49238 Y_RNA.409-201ENST00000383990 98 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 SNORA48.1-201ENST00000390879 135 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AL117339.3-201ENST00000418733 162 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AL606489.2-201ENST00000433886 234 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 RPL7P54-201ENST00000438336 674 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 RPL31P3-201ENST00000458430 332 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.48□□□□□ -2.17
CX3CR1P49238 AC104564.1-201ENST00000493028 407 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC079382.1-201ENST00000493346 557 ntBASIC1.48□□□□□ -2.17
CX3CR1P49238 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms