Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA1P38398 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA1P38398 AP003072.2-201ENST00000527756 676 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 AC137800.2-201ENST00000574375 120 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 TUSC7.1-201ENST00000610969 165 ntBASIC1.39□□□□□ -2.19
BRCA1P38398 RNU6-37P-201ENST00000362692 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-11P-201ENST00000364234 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-438P-201ENST00000365561 103 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-25P-201ENST00000383873 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-1029P-201ENST00000384109 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-48P-201ENST00000384161 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-16P-201ENST00000384385 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-15P-201ENST00000384534 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-29P-201ENST00000384637 107 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 MIR1285-1-201ENST00000408593 84 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA1P38398 AC112492.4-201ENST00000456549 352 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.38□□□□□ -2.19
BRCA1P38398 MTCO3P7-201ENST00000510008 774 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA1P38398 Y_RNA.672-201ENST00000516289 104 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 SNORA43.2-201ENST00000516652 128 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA1P38398 AP003122.4-201ENST00000530980 758 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.38□□□□□ -2.19
BRCA1P38398 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.38□□□□□ -2.19
BRCA1P38398 AL356157.2-201ENST00000605122 111 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 Z99289.3-201ENST00000605586 594 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.38□□□□□ -2.19
BRCA1P38398 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
BRCA1P38398 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA1P38398 MTND5P17-201ENST00000418405 1603 ntBASIC1.38□□□□□ -2.19
BRCA1P38398 RNU6-655P-201ENST00000362858 107 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 Y_RNA.132-201ENST00000363421 102 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 RNU4-38P-201ENST00000364472 129 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 RNU6-116P-201ENST00000384042 109 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 Y_RNA.576-201ENST00000384781 102 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 BTF3L4P2-201ENST00000392798 346 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.37□□□□□ -2.19
BRCA1P38398 AC009310.1-201ENST00000414414 451 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC098592.1-201ENST00000419352 333 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 SNRPEP10-201ENST00000420249 274 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AL590556.1-201ENST00000423231 483 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.37□□□□□ -2.19
BRCA1P38398 Vault.3-201ENST00000516676 95 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC022022.2-201ENST00000602989 360 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AL158032.1-201ENST00000605401 106 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC022202.1-201ENST00000613515 211 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC026585.1-201ENST00000619582 524 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC106754.1-201ENST00000562632 1513 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 RNU6-809P-201ENST00000384461 107 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
BRCA1P38398 PIGFP2-201ENST00000421400 651 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC010099.3-201ENST00000423896 409 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 VN1R108P-201ENST00000431580 830 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AL133217.1-201ENST00000450980 425 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.37□□□□□ -2.19
BRCA1P38398 AC087884.1-201ENST00000469738 328 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 MED28P2-201ENST00000475771 317 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.37□□□□□ -2.19
BRCA1P38398 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.37□□□□□ -2.19
BRCA1P38398 AC078795.2-201ENST00000602835 1252 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC018889.1-201ENST00000605372 397 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC093788.1-201ENST00000609356 927 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC004908.3-201ENST00000610248 625 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 MIR8074-201ENST00000615081 81 ntBASIC1.37□□□□□ -2.19
BRCA1P38398 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA1P38398 SNORA8-201ENST00000384574 139 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 MIR10A-201ENST00000385043 110 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 MIR513B-201ENST00000385136 84 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 RNU2-7P-201ENST00000410794 178 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 EEF1A1P40-201ENST00000412883 573 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 AC011233.1-201ENST00000422812 283 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.36□□□□□ -2.19
BRCA1P38398 AL583843.1-201ENST00000456070 346 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.36□□□□□ -2.19
BRCA1P38398 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.36□□□□□ -2.19
BRCA1P38398 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.36□□□□□ -2.19
BRCA1P38398 AC087883.1-201ENST00000551882 391 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 ZNF519P3-201ENST00000557158 1032 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 CYP3A137P-201ENST00000562436 69 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 MIR3136-201ENST00000583498 78 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 AC112191.3-201ENST00000604371 277 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA1P38398 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 AC091932.3-201ENST00000624223 323 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
BRCA1P38398 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
BRCA1P38398 RNU5F-7P-201ENST00000363696 115 ntBASIC1.35□□□□□ -2.19
BRCA1P38398 RNU6-384P-201ENST00000364900 104 ntBASIC1.35□□□□□ -2.19
BRCA1P38398 RNU6-43P-201ENST00000384302 107 ntBASIC1.35□□□□□ -2.19
BRCA1P38398 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.35□□□□□ -2.19
BRCA1P38398 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.35□□□□□ -2.19
BRCA1P38398 AC007969.2-201ENST00000441891 191 ntBASIC1.35□□□□□ -2.19
BRCA1P38398 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.35□□□□□ -2.19
BRCA1P38398 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.35□□□□□ -2.19
BRCA1P38398 RNU2-44P-201ENST00000516795 194 ntBASIC1.35□□□□□ -2.19
BRCA1P38398 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.35□□□□□ -2.19
BRCA1P38398 AL020996.3-201ENST00000606617 222 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms