Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 S100A11P2-201ENST00000467589 312 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-711P-201ENST00000517255 106 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A4P31645 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A4P31645 MIR5188-201ENST00000583467 113 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RPL23AP78-201ENST00000599928 470 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AC124312.5-201ENST00000604451 268 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-91P-201ENST00000607774 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC6A4P31645 AL162274.2-201ENST00000614406 332 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AC087588.2-201ENST00000617667 426 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 U2.1-201ENST00000618978 145 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AC137590.2-201ENST00000619709 240 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC6A4P31645 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A4P31645 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SLC6A4P31645 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A4P31645 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A4P31645 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 SNORD115-32-201ENST00000364079 82 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 RNU4-50P-201ENST00000364361 141 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 SNORD32A-201ENST00000364805 84 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 MIR190B-201ENST00000401119 79 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 MIR1252-201ENST00000408861 65 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 COTL1P1-201ENST00000422309 375 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 DPH3P2-201ENST00000422618 250 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 PTGES3P4-201ENST00000426243 356 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AL031659.1-201ENST00000447075 539 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 snoU13.30-201ENST00000458951 104 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 RPS27P29-201ENST00000463110 252 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC104564.1-201ENST00000493028 407 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC016632.1-201ENST00000503994 196 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC6A4P31645 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC6A4P31645 AC040926.1-201ENST00000530195 238 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AP002404.1-201ENST00000532005 451 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A4P31645 AC008269.2-201ENST00000561915 1105 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 AL021879.1-201ENST00000611756 288 ntBASIC3.2□□□□□ -1.9
SLC6A4P31645 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A4P31645 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A4P31645 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A4P31645 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A4P31645 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A4P31645 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A4P31645 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A4P31645 Y_RNA.153-201ENST00000363615 91 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 U3.13-201ENST00000364804 214 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 Y_RNA.485-201ENST00000384395 102 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 RNU6-19P-201ENST00000384718 107 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 Y_RNA.592-201ENST00000410274 109 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 RN7SKP61-201ENST00000410642 295 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 AL358453.1-201ENST00000422522 250 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 AL353705.4-201ENST00000449661 238 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 MTCO3P8-201ENST00000453691 755 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 RNU5B-3P-201ENST00000516601 115 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A4P31645 RPS29P30-201ENST00000600975 111 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 AL355877.2-201ENST00000603670 358 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 RMST_6.1-201ENST00000611980 203 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SLC6A4P31645 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
SLC6A4P31645 AC002543.1-201ENST00000299783 1954 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC092268.1-201ENST00000342691 405 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 RNU1-140P-201ENST00000365040 165 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.405-201ENST00000383979 100 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.451-201ENST00000384200 100 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.524-201ENST00000384564 100 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.551-201ENST00000384661 102 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.561-201ENST00000384694 100 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 MIR544A-201ENST00000384855 91 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC023141.4-201ENST00000412031 328 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC078809.1-201ENST00000427601 140 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC073910.1-201ENST00000445047 438 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 CHEK2P4-201ENST00000450340 246 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 RPL22P13-201ENST00000493291 347 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 Y_RNA.715-201ENST00000517082 110 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC115990.1-201ENST00000526957 301 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A4P31645 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A4P31645 AC004817.2-201ENST00000561794 651 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A4P31645 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A4P31645 RPL23AP88-201ENST00000605759 454 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AC007792.1-201ENST00000623023 402 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 AP000560.1-201ENST00000624150 1937 ntBASIC3.18□□□□□ -1.9
SLC6A4P31645 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms