Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC010999.1-201ENST00000611856 324 ntBASIC3.55□□□□□ -1.84
HOXC12P31275 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC12P31275 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC12P31275 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC12P31275 Y_RNA.20-201ENST00000362479 113 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 RNU6-626P-201ENST00000363354 107 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 RNU6-102P-201ENST00000384485 104 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 U3.26-201ENST00000391236 204 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 Y_RNA.595-201ENST00000410403 105 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 RNU5A-5P-201ENST00000411054 116 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC12P31275 HLA-N-201ENST00000437516 135 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC12P31275 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC12P31275 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC12P31275 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC12P31275 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 MIR3923-201ENST00000579521 83 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC12P31275 AL162713.1-201ENST00000604480 262 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 MIR7151-201ENST00000617477 60 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 MIR7154-201ENST00000620673 73 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 AL354798.1-201ENST00000622505 329 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 MIR6500-201ENST00000622700 86 ntBASIC3.54□□□□□ -1.84
HOXC12P31275 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC12P31275 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HOXC12P31275 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC12P31275 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC12P31275 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC12P31275 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC12P31275 Y_RNA.40-201ENST00000362645 93 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 RNU6-1010P-201ENST00000362757 107 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 RNU4-90P-201ENST00000362773 141 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXC12P31275 RNU6-338P-201ENST00000383888 105 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 Y_RNA.462-201ENST00000384268 102 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXC12P31275 AL603910.2-201ENST00000407268 136 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 RNU4-30P-201ENST00000410245 143 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC12P31275 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC12P31275 AC112220.1-201ENST00000434628 355 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC12P31275 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC12P31275 AP001324.2-201ENST00000461163 319 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 SEPT14P8-201ENST00000508026 178 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 AP006245.1-201ENST00000522549 120 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC12P31275 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC12P31275 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC12P31275 AC012493.2-201ENST00000595083 291 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC12P31275 AL133393.1-201ENST00000603277 287 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 MIR6868-201ENST00000611215 58 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 AC012314.7-201ENST00000619693 93 ntBASIC3.53□□□□□ -1.84
HOXC12P31275 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC12P31275 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC12P31275 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXC12P31275 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.85
HOXC12P31275 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.53□□□□□ -1.85
HOXC12P31275 AC093010.3-201ENST00000570269 15214 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC12P31275 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC12P31275 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC12P31275 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC12P31275 RNU5F-3P-201ENST00000363767 117 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 RNU6-961P-201ENST00000363893 105 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 Y_RNA.352-201ENST00000365439 102 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 RNU6-20P-201ENST00000384106 107 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 CBX3P9-201ENST00000402326 552 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AL033519.2-201ENST00000403958 392 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AL365496.1-201ENST00000426885 215 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC12P31275 HSPE1P25-201ENST00000455484 251 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AC112771.1-201ENST00000463581 102 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AC007215.1-201ENST00000464893 276 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC12P31275 RPL26P26-201ENST00000480251 434 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 RPS23P5-201ENST00000495419 428 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC12P31275 SNORA40.9-201ENST00000515895 93 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 SNORA74D-201ENST00000516404 141 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 RNU7-110P-201ENST00000516891 62 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC12P31275 AL034555.1-201ENST00000604816 211 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 SNORD113-5-201ENST00000607261 78 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 AC096577.2-201ENST00000611455 153 ntBASIC3.52□□□□□ -1.85
HOXC12P31275 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXC12P31275 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC12P31275 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC12P31275 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HOXC12P31275 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC12P31275 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC12P31275 Y_RNA.65-201ENST00000362846 100 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 Y_RNA.277-201ENST00000364754 102 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms