Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXA11P31270 RNU6-1059P-201ENST00000363752 98 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 RNU6-140P-201ENST00000384566 108 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 SNORA67.4-201ENST00000384688 142 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 Y_RNA.623-201ENST00000411128 95 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 SNORD56-201ENST00000413522 71 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 RNA5SP290-201ENST00000517133 127 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.87□□□□□ -1.95
HOXA11P31270 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 MIR4298-201ENST00000584380 73 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 AC007485.1-201ENST00000616755 206 ntBASIC2.87□□□□□ -1.95
HOXA11P31270 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HOXA11P31270 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HOXA11P31270 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA11P31270 MTND4P1-201ENST00000457501 1466 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA11P31270 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXA11P31270 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 RNU6-331P-201ENST00000384724 107 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AC009963.1-201ENST00000417265 157 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AL117339.3-201ENST00000418733 162 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA11P31270 MTCYBP9-201ENST00000431021 303 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA11P31270 IPO7P1-201ENST00000442031 636 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 PCMTD1P1-201ENST00000455560 355 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA11P31270 RPL26P9-201ENST00000457466 433 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA11P31270 AC022493.2-201ENST00000506122 481 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AC104576.1-201ENST00000524225 88 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA11P31270 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.86□□□□□ -1.95
HOXA11P31270 AL121917.1-203ENST00000605534 577 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA11P31270 7SK.10-201ENST00000621414 298 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXA11P31270 AC138627.2-201ENST00000624202 601 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.86□□□□□ -1.95
HOXA11P31270 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXA11P31270 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA11P31270 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA11P31270 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA11P31270 U8.8-201ENST00000365399 135 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 Y_RNA.364-201ENST00000365532 101 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 Y_RNA.645-201ENST00000391229 102 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AL591034.2-201ENST00000402839 359 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC099799.1-201ENST00000439809 192 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA11P31270 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 RNU6-1037P-201ENST00000459571 107 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXA11P31270 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 MTCO2P24-201ENST00000515611 426 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 RNU6-764P-201ENST00000516396 105 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC025755.1-201ENST00000521306 278 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXA11P31270 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA11P31270 AC027176.1-201ENST00000560204 514 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC109446.1-201ENST00000566172 220 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA11P31270 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA11P31270 IGHVIII-44-202ENST00000636235 289 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 U2.21-201ENST00000637295 81 ntBASIC2.85□□□□□ -1.95
HOXA11P31270 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA11P31270 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA11P31270 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA11P31270 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HOXA11P31270 Y_RNA.2-201ENST00000362330 96 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 Y_RNA.428-201ENST00000384078 102 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 MIR568-201ENST00000385036 95 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AL512633.1-201ENST00000399931 655 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 MIR888-201ENST00000401186 77 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 RNU6-325P-201ENST00000411132 105 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA11P31270 SNRPEP9-201ENST00000436794 238 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 HIGD1AP2-201ENST00000446367 280 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AL513328.1-201ENST00000446460 224 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 CECR9-201ENST00000453421 199 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA11P31270 RN7SL429P-201ENST00000479090 223 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 RN7SL489P-201ENST00000486185 223 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 RN7SL327P-201ENST00000488659 223 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 SNORD116.3-201ENST00000517176 78 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AC109479.2-201ENST00000517842 174 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 HMGN2P15-201ENST00000585707 270 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HOXA11P31270 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA11P31270 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AL132822.1-201ENST00000617063 513 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 RN7SL853P-201ENST00000617250 223 ntBASIC2.84□□□□□ -1.95
HOXA11P31270 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms