Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN3P26045 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PTPN3P26045 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN3P26045 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN3P26045 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN3P26045 AP000560.1-201ENST00000624150 1937 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RNU6-655P-201ENST00000362858 107 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RNU6-1285P-201ENST00000363480 105 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 MIR561-201ENST00000385216 97 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AP000275.1-201ENST00000411943 390 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 VN1R36P-201ENST00000414936 291 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RPL30P16-201ENST00000419341 429 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC008267.5-201ENST00000424928 265 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AIMP1P2-201ENST00000425294 312 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RPL23AP95-201ENST00000426806 265 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN3P26045 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN3P26045 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN3P26045 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN3P26045 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RNU6-864P-201ENST00000516256 108 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RNU6-256P-201ENST00000516747 97 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN3P26045 AC115990.1-201ENST00000526957 301 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC118273.2-201ENST00000532092 465 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 BNIP3P10-201ENST00000605360 577 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
PTPN3P26045 AC064836.2-201ENST00000609491 462 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AC104237.2-201ENST00000612456 443 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AL138726.1-201ENST00000614873 333 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN3P26045 AC241585.2-209ENST00000638217 143 ntBASIC2.35□□□□□ -2.03
PTPN3P26045 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 RNU6-1210P-201ENST00000363775 107 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 RNU6-1141P-201ENST00000364520 107 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 SNORD32A-201ENST00000364805 84 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AL445529.1-201ENST00000398713 389 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN3P26045 MTCO3P46-201ENST00000425787 232 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 IFNA11P-201ENST00000446352 526 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 RPL31P58-201ENST00000469001 379 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AL121594.1-201ENST00000475906 575 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AC092436.3-201ENST00000511788 257 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN3P26045 MIR3126-201ENST00000577443 74 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AP001836.1-201ENST00000604675 523 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN3P26045 AC100810.6-201ENST00000638068 285 ntBASIC2.34□□□□□ -2.03
PTPN3P26045 MTND4P23-201ENST00000447723 1363 ntBASIC2.34□□□□□ -2.04
PTPN3P26045 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.33□□□□□ -2.04
PTPN3P26045 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 U3.13-201ENST00000364804 214 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN3P26045 Y_RNA.500-201ENST00000384466 111 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 RNU6-692P-201ENST00000384496 107 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 CBX3P9-201ENST00000402326 552 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AL356776.1-201ENST00000406574 447 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 RN7SKP61-201ENST00000410642 295 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AL139415.2-201ENST00000431968 163 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 RPL32P28-201ENST00000443577 397 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN3P26045 UBE2DNL-203ENST00000474922 222 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN3P26045 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN3P26045 RN7SKP256-201ENST00000517201 314 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 RNU6-586P-201ENST00000517265 104 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN3P26045 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AC026371.1-201ENST00000551867 419 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 TRAV32-201ENST00000553993 340 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN3P26045 AL670379.2-201ENST00000604983 252 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AL161423.1-201ENST00000613700 262 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 AC009033.1-201ENST00000624279 431 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN3P26045 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
PTPN3P26045 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PTPN3P26045 Y_RNA.86-201ENST00000363020 111 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 RNU6-1283P-201ENST00000365314 105 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 SNORA26.3-201ENST00000391119 136 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN3P26045 SNRPGP7-201ENST00000469016 106 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 RPL30P1-201ENST00000488676 339 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 MTCO1P29-201ENST00000496868 288 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 MTCO2P30-201ENST00000503662 364 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 AC022447.4-201ENST00000504053 364 ntBASIC2.32□□□□□ -2.04
PTPN3P26045 AC010486.1-201ENST00000511793 424 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms