Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX58O95786 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
DDX58O95786 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX58O95786 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.67□□□□□ -1.98
DDX58O95786 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX58O95786 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.67□□□□□ -1.98
DDX58O95786 AL158827.2-201ENST00000602494 330 ntBASIC2.67□□□□□ -1.98
DDX58O95786 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.67□□□□□ -1.98
DDX58O95786 AL691447.3-201ENST00000635020 330 ntBASIC2.67□□□□□ -1.98
DDX58O95786 MIR3688-2-201ENST00000636963 87 ntBASIC2.67□□□□□ -1.98
DDX58O95786 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX58O95786 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX58O95786 CBX3P9-201ENST00000402326 552 ntBASIC2.66□□□□□ -1.98
DDX58O95786 Y_RNA.619-201ENST00000410951 90 ntBASIC2.66□□□□□ -1.98
DDX58O95786 MTND1P4-201ENST00000435196 415 ntBASIC2.66□□□□□ -1.98
DDX58O95786 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX58O95786 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.66□□□□□ -1.98
DDX58O95786 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX58O95786 AC115990.1-201ENST00000526957 301 ntBASIC2.66□□□□□ -1.98
DDX58O95786 MIR5692C1-201ENST00000585309 91 ntBASIC2.66□□□□□ -1.98
DDX58O95786 AC091135.1-201ENST00000585943 307 ntBASIC2.66□□□□□ -1.98
DDX58O95786 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
DDX58O95786 MIR7843-201ENST00000622274 79 ntBASIC2.66□□□□□ -1.98
DDX58O95786 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX58O95786 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DDX58O95786 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
DDX58O95786 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
DDX58O95786 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
DDX58O95786 snoU2_19.1-201ENST00000362361 80 ntBASIC2.65□□□□□ -1.99
DDX58O95786 MIR450B-201ENST00000401182 78 ntBASIC2.65□□□□□ -1.99
DDX58O95786 RNU6-373P-201ENST00000411247 98 ntBASIC2.65□□□□□ -1.99
DDX58O95786 AL117339.3-201ENST00000418733 162 ntBASIC2.65□□□□□ -1.99
DDX58O95786 SNRPEP10-201ENST00000420249 274 ntBASIC2.65□□□□□ -1.99
DDX58O95786 EIF1P1-201ENST00000421436 341 ntBASIC2.65□□□□□ -1.99
DDX58O95786 AL445646.1-201ENST00000431784 216 ntBASIC2.65□□□□□ -1.99
DDX58O95786 USP9YP8-201ENST00000441913 500 ntBASIC2.65□□□□□ -1.99
DDX58O95786 snoU13.14-201ENST00000459372 104 ntBASIC2.65□□□□□ -1.99
DDX58O95786 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX58O95786 AC068781.1-201ENST00000488231 618 ntBASIC2.65□□□□□ -1.99
DDX58O95786 RPL30P1-201ENST00000488676 339 ntBASIC2.65□□□□□ -1.99
DDX58O95786 RNU6-1069P-201ENST00000516612 133 ntBASIC2.65□□□□□ -1.99
DDX58O95786 SNORA48.11-201ENST00000517015 89 ntBASIC2.65□□□□□ -1.99
DDX58O95786 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX58O95786 AC118273.2-201ENST00000532092 465 ntBASIC2.65□□□□□ -1.99
DDX58O95786 IMMP1LP2-201ENST00000552954 492 ntBASIC2.65□□□□□ -1.99
DDX58O95786 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX58O95786 BNIP3P16-201ENST00000589779 534 ntBASIC2.65□□□□□ -1.99
DDX58O95786 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
DDX58O95786 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX58O95786 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
DDX58O95786 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX58O95786 Y_RNA.40-201ENST00000362645 93 ntBASIC2.64□□□□□ -1.99
DDX58O95786 MIR29B2-201ENST00000385055 81 ntBASIC2.64□□□□□ -1.99
DDX58O95786 MIR504-201ENST00000385065 83 ntBASIC2.64□□□□□ -1.99
DDX58O95786 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
DDX58O95786 MRPS10P2-201ENST00000431226 381 ntBASIC2.64□□□□□ -1.99
DDX58O95786 RPS15AP10-201ENST00000432472 382 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC243964.1-201ENST00000441814 261 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC011352.1-201ENST00000512300 793 ntBASIC2.64□□□□□ -1.99
DDX58O95786 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.64□□□□□ -1.99
DDX58O95786 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX58O95786 RNU6-1332P-201ENST00000516666 104 ntBASIC2.64□□□□□ -1.99
DDX58O95786 MTND1P5-201ENST00000517906 940 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC104576.1-201ENST00000524225 88 ntBASIC2.64□□□□□ -1.99
DDX58O95786 COPS8P3-201ENST00000526024 482 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.64□□□□□ -1.99
DDX58O95786 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX58O95786 AP000907.4-201ENST00000604143 237 ntBASIC2.64□□□□□ -1.99
DDX58O95786 RMST_3.1-201ENST00000611651 109 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC122108.2-201ENST00000611946 526 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC084782.3-201ENST00000612282 578 ntBASIC2.64□□□□□ -1.99
DDX58O95786 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX58O95786 MIR3662-201ENST00000637030 95 ntBASIC2.64□□□□□ -1.99
DDX58O95786 AC241585.2-209ENST00000638217 143 ntBASIC2.64□□□□□ -1.99
DDX58O95786 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
DDX58O95786 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
DDX58O95786 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
DDX58O95786 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
DDX58O95786 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX58O95786 RNU6-1252P-201ENST00000363054 104 ntBASIC2.63□□□□□ -1.99
DDX58O95786 RNU6-522P-201ENST00000364497 107 ntBASIC2.63□□□□□ -1.99
DDX58O95786 Y_RNA.256-201ENST00000364594 104 ntBASIC2.63□□□□□ -1.99
DDX58O95786 RNU6-534P-201ENST00000364877 106 ntBASIC2.63□□□□□ -1.99
DDX58O95786 RNU6-214P-201ENST00000384130 107 ntBASIC2.63□□□□□ -1.99
DDX58O95786 RNU6-692P-201ENST00000384496 107 ntBASIC2.63□□□□□ -1.99
DDX58O95786 MIR95-201ENST00000385072 81 ntBASIC2.63□□□□□ -1.99
DDX58O95786 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.63□□□□□ -1.99
DDX58O95786 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX58O95786 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX58O95786 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX58O95786 AC008628.2-201ENST00000502605 298 ntBASIC2.63□□□□□ -1.99
DDX58O95786 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
DDX58O95786 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.63□□□□□ -1.99
DDX58O95786 CYCSP26-201ENST00000534107 320 ntBASIC2.63□□□□□ -1.99
DDX58O95786 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX58O95786 AC100810.6-201ENST00000638068 285 ntBASIC2.63□□□□□ -1.99
DDX58O95786 Z82209.1-201ENST00000422141 2135 ntBASIC2.63□□□□□ -1.99
DDX58O95786 ZNF271P-202ENST00000465539 1970 ntBASIC2.62□□□□□ -1.99
DDX58O95786 MIR1289-2-201ENST00000408360 111 ntBASIC2.62□□□□□ -1.99
DDX58O95786 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms