Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SNORA46-201ENST00000384762 135 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 RNA5SP384-201ENST00000516615 116 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 AP005902.1-201ENST00000521358 186 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 MIR4273-201ENST00000582824 84 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 AC005034.5-201ENST00000604219 466 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 PART1_1.1-201ENST00000611761 217 ntBASIC3.88□□□□□ -1.79
RAPGEF3O95398 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.88□□□□□ -1.79
RAPGEF3O95398 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAPGEF3O95398 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-1115P-201ENST00000362490 106 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-428P-201ENST00000362942 107 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-490P-201ENST00000362985 107 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-105P-201ENST00000363909 104 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-1280P-201ENST00000365211 107 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-198P-201ENST00000384258 104 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-692P-201ENST00000384496 107 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.87□□□□□ -1.79
RAPGEF3O95398 AC011816.1-201ENST00000441346 546 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.87□□□□□ -1.79
RAPGEF3O95398 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.87□□□□□ -1.79
RAPGEF3O95398 AL163540.1-201ENST00000485382 386 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 SCARNA16.2-201ENST00000516520 172 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-612P-201ENST00000516909 102 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 RNU6-264P-201ENST00000517134 104 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 CR383656.8-201ENST00000549046 145 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 AC009163.5-201ENST00000575421 637 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 MIR4635-201ENST00000583759 79 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 BNIP3P16-201ENST00000589779 534 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.87□□□□□ -1.79
RAPGEF3O95398 MIR3976-201ENST00000606807 139 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 MIR3199-2-201ENST00000636243 86 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 ADAM3A-203ENST00000461344 2157 ntBASIC3.87□□□□□ -1.79
RAPGEF3O95398 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAPGEF3O95398 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAPGEF3O95398 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 Y_RNA.162-201ENST00000363683 102 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 RNU6-331P-201ENST00000384724 107 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 MIR181A2-201ENST00000384863 110 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 EIF4EP2-201ENST00000422816 654 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 RPL23AP50-201ENST00000434149 455 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAPGEF3O95398 MIR2053-201ENST00000459295 91 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 RPL23AP49-201ENST00000492925 468 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 RNU6-988P-201ENST00000519081 107 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 HMGN2P15-201ENST00000585707 270 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 RMST_8.1-201ENST00000610287 165 ntBASIC3.86□□□□□ -1.79
RAPGEF3O95398 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAPGEF3O95398 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RAPGEF3O95398 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAPGEF3O95398 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAPGEF3O95398 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.85□□□□□ -1.79
RAPGEF3O95398 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAPGEF3O95398 Y_RNA.28-201ENST00000362554 111 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 RNU6-527P-201ENST00000363425 104 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 Y_RNA.252-201ENST00000364556 101 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 Y_RNA.463-201ENST00000384271 102 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 MIR521-1-201ENST00000384902 87 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC245291.1-201ENST00000419501 328 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC018865.2-201ENST00000423631 129 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AL591043.1-201ENST00000432461 424 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AL035666.1-201ENST00000446195 348 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC116655.1-201ENST00000508324 901 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC234781.5-201ENST00000508429 271 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 SNORA31.18-201ENST00000517043 134 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC023442.1-201ENST00000531247 422 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC006199.1-201ENST00000548728 219 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.85□□□□□ -1.79
RAPGEF3O95398 MTCO3P13-201ENST00000577757 781 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC020895.1-201ENST00000595362 272 ntBASIC3.85□□□□□ -1.79
RAPGEF3O95398 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.85□□□□□ -1.79
RAPGEF3O95398 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RAPGEF3O95398 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAPGEF3O95398 MTND5P30-201ENST00000452896 1731 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 Y_RNA.5-201ENST00000362334 102 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 RNU6-227P-201ENST00000362865 103 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RAPGEF3O95398 PMCHL1-202ENST00000423102 261 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.84□□□□□ -1.79
RAPGEF3O95398 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAPGEF3O95398 AC096638.1-201ENST00000444678 216 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 AC068781.1-201ENST00000488231 618 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 AC022493.2-201ENST00000506122 481 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.84□□□□□ -1.79
RAPGEF3O95398 AC006504.6-201ENST00000590142 199 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 AC010620.2-201ENST00000600135 313 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms