Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CTNND1O60716 OR56A5-201ENST00000340110 738 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 Y_RNA.58-201ENST00000362807 102 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 RNU6-1285P-201ENST00000363480 105 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 Y_RNA.154-201ENST00000363624 102 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 RNY3P1-201ENST00000365085 102 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 RNY3-201ENST00000365484 102 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 Y_RNA.490-201ENST00000384413 102 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 SNORA75.4-201ENST00000391278 119 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AL591034.2-201ENST00000402839 359 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AL139095.1-201ENST00000404326 391 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 RNA5SP508-201ENST00000411327 119 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC078809.1-201ENST00000427601 140 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC236972.2-201ENST00000434979 310 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNND1O60716 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC115990.1-201ENST00000526957 301 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 APOOP3-201ENST00000536787 586 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 HSPE1P4-201ENST00000550617 308 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNND1O60716 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNND1O60716 MIR4273-201ENST00000582824 84 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC073410.2-201ENST00000603240 332 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 AC009229.3-201ENST00000608056 282 ntBASIC3.21□□□□□ -1.9
CTNND1O60716 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNND1O60716 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNND1O60716 Y_RNA.123-201ENST00000363338 102 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU6-1059P-201ENST00000363752 98 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU6-1188P-201ENST00000363795 107 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU6-842P-201ENST00000384269 107 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU6-784P-201ENST00000384330 106 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 Y_RNA.473-201ENST00000384333 102 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU1-57P-201ENST00000384491 166 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 Y_RNA.509-201ENST00000384506 99 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 MIR186-201ENST00000384988 86 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNU6-174P-201ENST00000410406 106 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RN7SKP61-201ENST00000410642 295 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 AL513477.1-202ENST00000417061 214 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 MTCO2P27-201ENST00000420740 428 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNND1O60716 AC244670.1-201ENST00000436879 112 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 snoU13.14-201ENST00000459372 104 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNND1O60716 SNORA25.11-201ENST00000515935 105 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNND1O60716 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNND1O60716 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 ZNF861P-201ENST00000588126 639 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNND1O60716 KPNA2P1-201ENST00000458289 1591 ntBASIC3.2□□□□□ -1.9
CTNND1O60716 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNND1O60716 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTNND1O60716 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 Y_RNA.2-201ENST00000362330 96 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 RNU6-212P-201ENST00000362642 104 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 XGY1-201ENST00000381172 446 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 SNORA67.4-201ENST00000384688 142 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 MTCYBP4-201ENST00000401524 249 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNND1O60716 EIF1AXP1-201ENST00000419267 435 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 EIF4EP2-201ENST00000422816 654 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNND1O60716 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNND1O60716 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNND1O60716 AC104564.1-201ENST00000493028 407 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 AC016632.1-201ENST00000503994 196 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 AC091874.1-201ENST00000511402 339 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 COX6CP5-201ENST00000527162 228 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNND1O60716 AC007375.1-201ENST00000554513 578 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNND1O60716 AC109446.1-201ENST00000566172 220 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNND1O60716 MTND4LP32-201ENST00000636111 270 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 MTND4P29-201ENST00000503122 1372 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNND1O60716 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNND1O60716 AP000560.1-201ENST00000624150 1937 ntBASIC3.19□□□□□ -1.9
CTNND1O60716 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTNND1O60716 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTNND1O60716 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNND1O60716 RNU6-142P-201ENST00000384019 107 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 AL356057.3-201ENST00000402607 340 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 BX276092.3-201ENST00000424182 230 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 SNORD19B-201ENST00000459623 84 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 RPL30P1-201ENST00000488676 339 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNND1O60716 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNND1O60716 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNND1O60716 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNND1O60716 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 SCARNA3-201ENST00000517097 143 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 Y_RNA.718-201ENST00000517110 102 ntBASIC3.18□□□□□ -1.9
CTNND1O60716 AL669831.3-213ENST00000636676 183 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms