Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 PMCHL2-203ENST00000457791 237 ntBASIC1.8□□□□□ -2.12
MSH4O15457 SNRPFP3-201ENST00000457792 225 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.8□□□□□ -2.12
MSH4O15457 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MSH4O15457 AC010493.1-201ENST00000513479 292 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC105417.1-201ENST00000514691 285 ntBASIC1.8□□□□□ -2.12
MSH4O15457 Y_RNA.688-201ENST00000516565 95 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC109479.2-201ENST00000517842 174 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AP005435.4-201ENST00000529514 284 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
MSH4O15457 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
MSH4O15457 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC073648.5-201ENST00000603502 305 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC002044.1-201ENST00000606707 158 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC068944.2-201ENST00000610373 403 ntBASIC1.8□□□□□ -2.12
MSH4O15457 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.8□□□□□ -2.12
MSH4O15457 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.8□□□□□ -2.12
MSH4O15457 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
MSH4O15457 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
MSH4O15457 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
MSH4O15457 RNU6-552P-201ENST00000362869 119 ntBASIC1.79□□□□□ -2.12
MSH4O15457 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MSH4O15457 RNU6-611P-201ENST00000384276 104 ntBASIC1.79□□□□□ -2.12
MSH4O15457 Y_RNA.597-201ENST00000410463 100 ntBASIC1.79□□□□□ -2.12
MSH4O15457 RNU6-293P-201ENST00000411259 106 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AL590556.1-201ENST00000423231 483 ntBASIC1.79□□□□□ -2.12
MSH4O15457 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AC108667.1-201ENST00000428618 249 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AC243964.1-201ENST00000441814 261 ntBASIC1.79□□□□□ -2.12
MSH4O15457 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.79□□□□□ -2.12
MSH4O15457 AL356057.1-201ENST00000533798 831 ntBASIC1.79□□□□□ -2.12
MSH4O15457 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
MSH4O15457 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
MSH4O15457 MTATP6P3-201ENST00000581686 676 ntBASIC1.79□□□□□ -2.12
MSH4O15457 RSL24D1P11-201ENST00000591045 491 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AC110760.3-201ENST00000598794 467 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AC091805.2-201ENST00000603848 235 ntBASIC1.79□□□□□ -2.12
MSH4O15457 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
MSH4O15457 MTND4P14-201ENST00000435799 1354 ntBASIC1.79□□□□□ -2.12
MSH4O15457 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNU6-428P-201ENST00000362942 107 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNU6-266P-201ENST00000364225 107 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNU6-336P-201ENST00000364891 107 ntBASIC1.78□□□□□ -2.12
MSH4O15457 SNORD116-2-201ENST00000384274 95 ntBASIC1.78□□□□□ -2.12
MSH4O15457 SNORD116-6-201ENST00000384711 96 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNU6-903P-201ENST00000391270 109 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC068050.1-201ENST00000394891 380 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH4O15457 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC073464.1-201ENST00000429823 534 ntBASIC1.78□□□□□ -2.12
MSH4O15457 MTCO2P16-201ENST00000436962 677 ntBASIC1.78□□□□□ -2.12
MSH4O15457 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH4O15457 MTND2P22-201ENST00000444325 1033 ntBASIC1.78□□□□□ -2.12
MSH4O15457 PRELID3BP1-201ENST00000457142 540 ntBASIC1.78□□□□□ -2.12
MSH4O15457 RNU7-63P-201ENST00000459054 62 ntBASIC1.78□□□□□ -2.12
MSH4O15457 SNRPGP7-201ENST00000469016 106 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH4O15457 RNU5F-2P-201ENST00000516066 82 ntBASIC1.78□□□□□ -2.12
MSH4O15457 SNORA25.17-201ENST00000517184 124 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC115990.1-201ENST00000526957 301 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC022880.1-201ENST00000534017 973 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC018630.3-201ENST00000542637 96 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH4O15457 AGGF1P4-201ENST00000568249 801 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AP005136.1-201ENST00000579765 429 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC107304.1-201ENST00000604229 296 ntBASIC1.78□□□□□ -2.12
MSH4O15457 AC104073.3-201ENST00000610942 955 ntBASIC1.78□□□□□ -2.12
MSH4O15457 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.78□□□□□ -2.12
MSH4O15457 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.78□□□□□ -2.12
MSH4O15457 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
MSH4O15457 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH4O15457 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
MSH4O15457 Y_RNA.77-201ENST00000362962 107 ntBASIC1.77□□□□□ -2.13
MSH4O15457 RNU6-743P-201ENST00000364151 106 ntBASIC1.77□□□□□ -2.13
MSH4O15457 RNU5A-6P-201ENST00000384136 116 ntBASIC1.77□□□□□ -2.13
MSH4O15457 RNU6-517P-201ENST00000384362 110 ntBASIC1.77□□□□□ -2.13
MSH4O15457 Y_RNA.553-201ENST00000384670 102 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.77□□□□□ -2.13
MSH4O15457 MTCYBP8-201ENST00000422855 651 ntBASIC1.77□□□□□ -2.13
MSH4O15457 DNAJC19P4-201ENST00000440115 345 ntBASIC1.77□□□□□ -2.13
MSH4O15457 MTCO1P19-201ENST00000443487 500 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AL031274.1-201ENST00000450334 232 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AMD1P1-201ENST00000457220 922 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AC010424.1-201ENST00000506336 297 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AC079140.5-201ENST00000507882 310 ntBASIC1.77□□□□□ -2.13
MSH4O15457 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.77□□□□□ -2.13
MSH4O15457 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.77□□□□□ -2.13
MSH4O15457 RN7SKP298-201ENST00000515950 94 ntBASIC1.77□□□□□ -2.13
MSH4O15457 RNU2-44P-201ENST00000516795 194 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.77□□□□□ -2.13
MSH4O15457 AL137161.1-201ENST00000532231 390 ntBASIC1.77□□□□□ -2.13
MSH4O15457 MTCO3P23-201ENST00000561363 289 ntBASIC1.77□□□□□ -2.13
MSH4O15457 MIR5583-1-201ENST00000580941 59 ntBASIC1.77□□□□□ -2.13
MSH4O15457 BNIP3P16-201ENST00000589779 534 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AP001596.2-201ENST00000608410 312 ntBASIC1.77□□□□□ -2.13
MSH4O15457 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms