Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CASC19-280ENST00000642102 1351 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.100-201ENST00000363141 102 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.399-201ENST00000383955 105 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.473-201ENST00000384333 102 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.481-201ENST00000384373 102 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-434P-201ENST00000384376 107 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 SNORD116-20-201ENST00000384529 92 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-750P-201ENST00000390946 107 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 SNORD23.1-201ENST00000408212 104 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AL121890.1-201ENST00000435457 205 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AL031274.1-201ENST00000450334 232 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 BTF3P15-201ENST00000455606 336 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AP001025.1-201ENST00000486139 332 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 RPL38P4-201ENST00000502376 214 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC018710.1-201ENST00000506509 158 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 SNORA14.1-201ENST00000516113 141 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1088P-201ENST00000516850 104 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AP005902.1-201ENST00000521358 186 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AP000763.2-201ENST00000540641 163 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 LINC00933-203ENST00000559812 219 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC060780.3-201ENST00000589464 80 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 AC103705.1-201ENST00000619013 241 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 Z69720.2-201ENST00000624755 279 ntBASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM49D1C9J1S8 RBBP8P1-201ENST00000449447 1844 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-858P-201ENST00000362436 107 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.40-201ENST00000362645 93 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1280P-201ENST00000365211 107 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-827P-201ENST00000365553 106 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 SNORD56-201ENST00000413522 71 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 MTCO3P18-201ENST00000440206 761 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 MTND4P17-201ENST00000470444 350 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.654-201ENST00000497848 106 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC091874.1-201ENST00000511402 339 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC104136.1-201ENST00000512969 394 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 SNORA19.2-201ENST00000516013 114 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1069P-201ENST00000516612 133 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 SNORA43.2-201ENST00000516652 128 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1332P-201ENST00000516666 104 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 SNORD60.2-201ENST00000516883 86 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-1314P-201ENST00000517139 104 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 SNORA59B-202ENST00000578183 701 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 MIR5692A1-201ENST00000580523 69 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AL355598.1-201ENST00000604169 202 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AL357078.3-201ENST00000607528 618 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 U2.17-201ENST00000611454 95 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 AC006504.8-201ENST00000621046 635 ntBASIC1.84□□□□□ -2.11
TRIM49D1C9J1S8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRIM49D1C9J1S8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU1-72P-201ENST00000362976 153 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 Y_RNA.184-201ENST00000363884 108 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-336P-201ENST00000364891 107 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNY3P14-201ENST00000384309 102 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-692P-201ENST00000384496 107 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AL117339.3-201ENST00000418733 162 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 NDUFB1P2-201ENST00000449477 176 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 TRBVA-201ENST00000498804 316 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AC008628.2-201ENST00000502605 298 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AC116353.2-201ENST00000505332 712 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 FAM206BP-201ENST00000510179 541 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AC092436.3-201ENST00000511788 257 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-507P-201ENST00000516045 100 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU4-49P-201ENST00000516080 140 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-358P-201ENST00000516564 75 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 SNORA31.23-201ENST00000517219 133 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-323P-201ENST00000521915 107 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 MIR3672-201ENST00000584290 82 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AL391813.1-201ENST00000603098 260 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms