Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU1-131P-201ENST00000458943 161 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 OR2A41P-201ENST00000473586 105 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC108078.1-201ENST00000508073 725 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC097473.1-201ENST00000508142 408 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC117522.1-201ENST00000509821 380 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC022616.3-201ENST00000523940 148 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AL451064.1-201ENST00000607718 471 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC138749.5-201ENST00000611461 208 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC116165.2-201ENST00000616705 206 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 Z69720.2-201ENST00000624755 279 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-105P-201ENST00000363909 104 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-53P-201ENST00000365367 106 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 MTCO2P8-201ENST00000412213 658 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 SSR1P2-201ENST00000415208 787 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 RPL21P111-201ENST00000418453 477 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 ELOCP4-201ENST00000420090 333 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AL365184.2-201ENST00000431139 435 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AL591043.1-201ENST00000432461 424 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 MTATP6P16-201ENST00000434543 526 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC243964.1-201ENST00000441814 261 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 TOMM22P6-201ENST00000465035 409 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 RPL26P26-201ENST00000480251 434 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 RNA5SP437-201ENST00000517249 129 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 MTCO2P2-201ENST00000591258 225 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AC110760.3-201ENST00000598794 467 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 AL078604.3-201ENST00000615580 211 ntBASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-527P-201ENST00000363425 104 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-501P-201ENST00000364072 100 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-692P-201ENST00000384496 107 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 Y_RNA.576-201ENST00000384781 102 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC123900.1-201ENST00000420390 96 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC137499.1-201ENST00000427602 88 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 C8orf59P1-201ENST00000429930 303 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC099677.2-201ENST00000436385 175 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 SNRPEP8-201ENST00000442866 260 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC244505.5-201ENST00000443639 207 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 RAP1BP2-201ENST00000478270 544 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC079140.2-201ENST00000506193 142 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 MTND3P5-201ENST00000512798 333 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 SNORA3.4-201ENST00000515969 96 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 SCARNA24.1-201ENST00000516465 137 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 SNORA31.16-201ENST00000516773 139 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC087883.1-201ENST00000551882 391 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC008752.3-201ENST00000588113 712 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC012507.3-201ENST00000603556 477 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC009159.2-201ENST00000617603 606 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 MIR8063-201ENST00000621930 81 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 SNORD98-201ENST00000636377 67 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 AC007671.2-201ENST00000637344 619 ntBASIC0.84□□□□□ -2.27
TRAV41A0A0B4J266 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.84□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-1303P-201ENST00000364841 107 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-26P-201ENST00000383985 107 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-43P-201ENST00000384302 107 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-360P-201ENST00000390944 104 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AP000275.1-201ENST00000411943 390 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AC245047.4-201ENST00000433189 144 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 EPS15P1-201ENST00000448836 336 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 RPS27AP8-201ENST00000452665 445 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 HMGN1P7-201ENST00000491722 313 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 MTCO3P28-201ENST00000513351 515 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 MIR5692A1-201ENST00000580523 69 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AL359999.1-201ENST00000604513 294 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 AC080078.3-201ENST00000605407 463 ntBASIC0.83□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-500P-201ENST00000362349 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-37P-201ENST00000362692 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-11P-201ENST00000364234 107 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 Y_RNA.255-201ENST00000364581 97 ntBASIC0.82□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-25P-201ENST00000383873 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms