Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC016632.1-201ENST00000503994 196 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC091874.1-201ENST00000511402 339 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AL590705.4-201ENST00000532209 134 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC105137.2-201ENST00000569073 466 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 UBL5P2-201ENST00000583788 219 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AC005034.5-201ENST00000604219 466 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AL159153.1-201ENST00000619688 317 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 SNORA43.4-201ENST00000629559 138 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 AP000560.1-201ENST00000624150 1937 ntBASIC3.19□□□□□ -1.9
PCDHA3Q9Y5H8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 Y_RNA.148-201ENST00000363557 117 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 SNORD67-201ENST00000390833 111 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 MRPS18CP6-201ENST00000423587 223 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AL358075.3-201ENST00000426289 226 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 RPL30P12-201ENST00000474666 353 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AP004217.1-201ENST00000480579 346 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC115990.1-201ENST00000526957 301 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 HSPE1P4-201ENST00000550617 308 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC104581.2-201ENST00000572227 430 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 MIR5571-201ENST00000577998 113 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 7SK.7-201ENST00000603504 247 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 AC040896.1-201ENST00000613819 479 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA3Q9Y5H8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC092268.1-201ENST00000342691 405 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RNU4-9P-201ENST00000364951 139 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RNU6-639P-201ENST00000384074 107 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RNVU1-14-201ENST00000384770 164 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 MIR606-201ENST00000384851 96 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 snosnR66.1-201ENST00000391095 99 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RPL23AP83-201ENST00000434984 473 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC244670.1-201ENST00000436879 112 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RPS3AP12-201ENST00000443616 753 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RPL23AP75-201ENST00000491601 451 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RNU7-4P-201ENST00000516961 62 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 MRPS36P4-201ENST00000534436 298 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC004584.2-201ENST00000570407 410 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AL355802.3-201ENST00000607571 545 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC006157.1-201ENST00000611750 366 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC007485.1-201ENST00000616755 206 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 SCARNA4-201ENST00000629045 128 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
PCDHA3Q9Y5H8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 SNORD114-19-201ENST00000363072 75 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 RNU6-738P-201ENST00000384531 106 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 RNU6-1160P-201ENST00000384546 104 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 U3.19-201ENST00000390893 196 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 SNORA12.2-201ENST00000391040 156 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 SNORA26.3-201ENST00000391119 136 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AL133475.1-201ENST00000404414 305 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 RNA5SP494-201ENST00000410653 129 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC007098.1-201ENST00000420122 367 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AL358453.1-201ENST00000422522 250 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 GSTA11P-201ENST00000452866 669 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 snoU13.14-201ENST00000459372 104 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AP001324.2-201ENST00000461163 319 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 RNU7-175P-201ENST00000515915 61 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 GNAI2P1-201ENST00000541815 315 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC007375.1-201ENST00000554513 578 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 AC092447.9-201ENST00000603395 144 ntBASIC3.16□□□□□ -1.9
PCDHA3Q9Y5H8 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms