Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC244505.5-201ENST00000443639 207 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AL035666.1-201ENST00000446195 348 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 RPS29P23-201ENST00000458635 123 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 FO393415.2-201ENST00000480085 343 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 MTND3P25-201ENST00000509243 135 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AP005597.4-201ENST00000526762 229 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AP002453.2-201ENST00000533503 320 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC073539.2-201ENST00000597113 165 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC027807.2-201ENST00000616099 408 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 AC009878.1-201ENST00000621819 340 ntBASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.12□□□□□ -2.23
RPUSD1Q9UJJ7 RNU1-62P-201ENST00000362599 164 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 RNA5SP493-201ENST00000364115 91 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-439P-201ENST00000384188 106 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-160P-201ENST00000384591 107 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 MTND4P20-201ENST00000424125 869 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AL591043.1-201ENST00000432461 424 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 HSFY7P-201ENST00000432672 318 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 HSFY8P-201ENST00000437934 318 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 MTND4LP16-201ENST00000440828 295 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 HSPE1P24-201ENST00000450782 238 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 HSFY5P-201ENST00000453726 309 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 RNU5F-2P-201ENST00000516066 82 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-685P-201ENST00000517088 95 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC022616.3-201ENST00000523940 148 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 ELOCP32-201ENST00000548625 324 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC008751.2-201ENST00000597885 980 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AL451064.1-201ENST00000607718 471 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AL590240.4-201ENST00000616908 390 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC091304.6-201ENST00000619761 202 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC097372.5-201ENST00000623665 376 ntBASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPUSD1Q9UJJ7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-179P-201ENST00000363350 107 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 SNORA62.1-201ENST00000364287 154 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 RNU5E-5P-201ENST00000365379 116 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 MIR544A-201ENST00000384855 91 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 RPL23AP32-201ENST00000395315 459 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 SDAD1P3-201ENST00000427380 333 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 USP9YP12-201ENST00000450481 570 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 MTCYBP18-201ENST00000501056 747 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 Y_RNA.672-201ENST00000516289 104 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-1220P-201ENST00000517126 108 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AP003461.1-201ENST00000528866 78 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 MIR3169-201ENST00000578032 83 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC112191.3-201ENST00000604371 277 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AP000654.2-201ENST00000605633 586 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AL121992.2-201ENST00000606262 256 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AP000240.1-201ENST00000609910 452 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC130454.1-201ENST00000622948 401 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 AC099654.13-201ENST00000639774 207 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 OR4G1P-203ENST00000641984 1631 ntBASIC1.1□□□□□ -2.23
RPUSD1Q9UJJ7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-527P-201ENST00000363425 104 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU5F-7P-201ENST00000363696 115 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 SNORD114-6-201ENST00000364393 72 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-1222P-201ENST00000384615 107 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU2-3P-201ENST00000410144 191 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-584P-201ENST00000410350 95 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-607P-201ENST00000411283 108 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 RNU6-387P-201ENST00000411331 105 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 AL356583.2-201ENST00000426536 280 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 MTATP6P16-201ENST00000434543 526 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 MIR449C-201ENST00000516047 92 ntBASIC1.09□□□□□ -2.23
RPUSD1Q9UJJ7 SCARNA24.1-201ENST00000516465 137 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms