Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 Y_RNA.67-201ENST00000362870 100 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 SNORA71.1-201ENST00000364523 117 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 U3.13-201ENST00000364804 214 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 MIR521-1-201ENST00000384902 87 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.86□□□□□ -1.95
LRFN1Q9P244 RPS3AP52-201ENST00000435639 297 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC116337.1-201ENST00000509680 687 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC109329.2-201ENST00000519658 482 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC023824.2-201ENST00000566185 400 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.86□□□□□ -1.95
LRFN1Q9P244 MIR4719-201ENST00000585233 84 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 POLR3GP2-201ENST00000588366 668 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC113139.1-201ENST00000605049 239 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 MIR3976-201ENST00000606807 139 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AL450472.1-202ENST00000637286 180 ntBASIC2.86□□□□□ -1.95
LRFN1Q9P244 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 RNU6-784P-201ENST00000384330 106 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 MIR95-201ENST00000385072 81 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC022018.1-201ENST00000430685 241 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 SNRPGP7-201ENST00000469016 106 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 HMGB1P35-201ENST00000503360 598 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRFN1Q9P244 IMMP1LP2-201ENST00000552954 492 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC060766.3-201ENST00000591442 263 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 AL356055.1-201ENST00000602528 446 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 SNORD98-201ENST00000636377 67 ntBASIC2.85□□□□□ -1.95
LRFN1Q9P244 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.85□□□□□ -1.95
LRFN1Q9P244 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 RNU4-76P-201ENST00000364509 141 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 RNU6-596P-201ENST00000365395 98 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.84□□□□□ -1.95
LRFN1Q9P244 SNORA44-201ENST00000384584 132 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 RNU6-306P-201ENST00000384617 107 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AL031121.1-201ENST00000406553 254 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 MTND1P14-201ENST00000427400 950 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AL353752.1-201ENST00000454946 260 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 SNORD5.1-201ENST00000458800 75 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 Y_RNA.635-201ENST00000459041 101 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC104564.1-201ENST00000493028 407 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
LRFN1Q9P244 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.84□□□□□ -1.95
LRFN1Q9P244 ACA59.1-201ENST00000515966 143 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC021231.3-201ENST00000558497 370 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AL050343.2-201ENST00000607338 280 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC093732.2-201ENST00000607950 274 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AL359198.2-201ENST00000611836 194 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 AC009487.2-201ENST00000420969 6821 ntBASIC2.84□□□□□ -1.95
LRFN1Q9P244 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LRFN1Q9P244 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
LRFN1Q9P244 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LRFN1Q9P244 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.84□□□□□ -1.96
LRFN1Q9P244 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.123-201ENST00000363338 102 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.384-201ENST00000383909 102 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.387-201ENST00000383918 102 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RNU6-142P-201ENST00000384019 107 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.482-201ENST00000384377 111 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.504-201ENST00000384481 104 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 SNORD67-201ENST00000390833 111 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RNU4-14P-201ENST00000410858 122 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC245054.2-201ENST00000415639 319 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN1Q9P244 CYP2C59P-201ENST00000457790 269 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 Y_RNA.632-201ENST00000459189 102 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 RPL21P39-201ENST00000463605 483 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC090515.1-201ENST00000465295 476 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC090525.1-201ENST00000479116 478 ntBASIC2.83□□□□□ -1.96
LRFN1Q9P244 AC087190.1-201ENST00000484462 480 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms