Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AP003072.2-201ENST00000527756 676 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AP005435.4-201ENST00000529514 284 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 MIR3682-201ENST00000581338 84 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC018889.1-201ENST00000605372 397 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC011155.2-201ENST00000623202 216 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 AC097372.5-201ENST00000623665 376 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 U6.114-201ENST00000636407 96 ntBASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KLHL28Q9NXS3 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 RNY3P10-201ENST00000384764 102 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 SNORA48.1-201ENST00000390879 135 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 RNU6-550P-201ENST00000391057 101 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AL049545.1-201ENST00000401856 572 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC079781.2-201ENST00000446424 169 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 MTCO2P6-201ENST00000463134 685 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 BET1P1-201ENST00000482276 359 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC098862.1-201ENST00000504991 413 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC104581.2-201ENST00000572227 430 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC098848.2-201ENST00000588023 330 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
KLHL28Q9NXS3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.16
KLHL28Q9NXS3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
KLHL28Q9NXS3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 CBX3P1-201ENST00000325243 554 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 FGF7P2-201ENST00000332473 296 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 RNU6-248P-201ENST00000410720 107 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 RPL31P35-201ENST00000431058 377 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AL035666.1-201ENST00000446195 348 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AL033528.1-201ENST00000453780 140 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 RNU6-333P-201ENST00000459117 107 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 RN7SKP210-201ENST00000459176 261 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC026407.1-201ENST00000518369 204 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AL356057.1-201ENST00000533798 831 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC007834.2-201ENST00000536310 343 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 Z94722.1-201ENST00000604328 474 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AC010900.2-201ENST00000604508 210 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 AP000654.2-201ENST00000605633 586 ntBASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
KLHL28Q9NXS3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-74P-201ENST00000384235 107 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-160P-201ENST00000384591 107 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 BX295541.1-201ENST00000417774 250 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 GPR143P-201ENST00000434155 205 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC243964.1-201ENST00000441814 261 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 MTND2P4-201ENST00000445034 1004 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC079448.1-201ENST00000449377 373 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 SNORD42A-201ENST00000459584 64 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC022447.4-201ENST00000504053 364 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AP001893.2-201ENST00000526949 202 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 OSBPL9P5-201ENST00000542581 171 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 MIR3913-1-201ENST00000577744 102 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC103987.3-201ENST00000582071 292 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC064872.1-201ENST00000604823 1072 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AC104073.3-201ENST00000610942 955 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 AP001506.1-201ENST00000615444 211 ntBASIC1.57□□□□□ -2.16
KLHL28Q9NXS3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms