Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 U3.13-201ENST00000364804 214 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 CBX3P9-201ENST00000402326 552 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 MIR548F5-201ENST00000408421 86 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC074085.1-201ENST00000413598 418 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC078809.1-201ENST00000427601 140 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AL133396.1-201ENST00000432048 687 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC244670.1-201ENST00000436879 112 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 USP9YP8-201ENST00000441913 500 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC107399.1-201ENST00000451226 265 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 RPL30P1-201ENST00000488676 339 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC140059.1-201ENST00000489238 361 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 RPS27P27-201ENST00000498779 255 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 Y_RNA.702-201ENST00000516843 96 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 HSPE1P4-201ENST00000550617 308 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 RPL30P11-203ENST00000598995 310 ntBASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A13Q9NSD5 AC009541.1-201ENST00000438279 2662 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC092268.1-201ENST00000342691 405 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 Y_RNA.339-201ENST00000365325 102 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 MIR521-1-201ENST00000384902 87 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AL356432.1-201ENST00000405809 419 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC016632.1-201ENST00000503994 196 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC022447.4-201ENST00000504053 364 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC091874.1-201ENST00000511402 339 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 RNU1-54P-201ENST00000517181 120 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC093249.1-201ENST00000567049 203 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 MIR3136-201ENST00000583498 78 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 POLR3GP2-201ENST00000588366 668 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 MIR3976-201ENST00000606807 139 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AC019193.3-201ENST00000609144 554 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
SLC6A13Q9NSD5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A13Q9NSD5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 RNU6-593P-201ENST00000364716 112 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 RN7SKP158-201ENST00000410453 326 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 RPS3AP52-201ENST00000435639 297 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC116337.1-201ENST00000509680 687 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 RNU5F-2P-201ENST00000516066 82 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AC134698.4-201ENST00000523451 826 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 AL713866.2-201ENST00000603579 219 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 MIR6128-201ENST00000615528 109 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 MIR6852-201ENST00000621699 66 ntBASIC2.54□□□□□ -2
SLC6A13Q9NSD5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC6A13Q9NSD5 RNU6-306P-201ENST00000384617 107 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 SNORA26.3-201ENST00000391119 136 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AL138827.1-201ENST00000402666 306 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC091951.2-201ENST00000500762 203 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 RN7SKP24-201ENST00000515888 284 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 RNU6-875P-201ENST00000516488 106 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms