Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC092747.3-201ENST00000603769 301 ntBASIC2.55□□□□□ -2
SDF4Q9BRK5 AC107304.1-201ENST00000604229 296 ntBASIC2.55□□□□□ -2
SDF4Q9BRK5 AL161423.1-201ENST00000613700 262 ntBASIC2.55□□□□□ -2
SDF4Q9BRK5 AP000560.1-201ENST00000624150 1937 ntBASIC2.55□□□□□ -2
SDF4Q9BRK5 AC090517.3-201ENST00000625170 141 ntBASIC2.55□□□□□ -2
SDF4Q9BRK5 SNORD116-4-201ENST00000384733 96 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 RN7SKP284-201ENST00000411002 343 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 EDDM3CP-201ENST00000415977 425 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 RPS15AP10-201ENST00000432472 382 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDF4Q9BRK5 RNU6-1208P-201ENST00000459588 107 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 RPL21P99-201ENST00000480369 423 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.54□□□□□ -2
SDF4Q9BRK5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDF4Q9BRK5 RNU6-1281P-201ENST00000516223 105 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 RNU6-1038P-201ENST00000516516 104 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.54□□□□□ -2
SDF4Q9BRK5 AC087854.1-201ENST00000519706 414 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.54□□□□□ -2
SDF4Q9BRK5 AL157687.1-201ENST00000554853 619 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.54□□□□□ -2
SDF4Q9BRK5 MIR3126-201ENST00000577443 74 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 ELOCP5-201ENST00000604924 333 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC018889.1-201ENST00000605372 397 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 AC064807.4-201ENST00000607201 407 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
SDF4Q9BRK5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.54□□□□□ -2
SDF4Q9BRK5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
SDF4Q9BRK5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SDF4Q9BRK5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SDF4Q9BRK5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 SNORD32A-201ENST00000364805 84 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 RNU6-483P-201ENST00000384088 108 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 MIR181A1-201ENST00000385026 110 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 RNU6-780P-201ENST00000391030 104 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 RNU6-908P-201ENST00000410160 94 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.53□□□□□ -2
SDF4Q9BRK5 AL513124.1-201ENST00000450410 614 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 RNU6-720P-201ENST00000516363 108 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.53□□□□□ -2
SDF4Q9BRK5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.53□□□□□ -2
SDF4Q9BRK5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.53□□□□□ -2
SDF4Q9BRK5 MIR3136-201ENST00000583498 78 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 AC092807.2-201ENST00000609367 243 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.53□□□□□ -2
SDF4Q9BRK5 MIR1321-201ENST00000637766 79 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
SDF4Q9BRK5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 Y_RNA.167-201ENST00000363735 109 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 Y_RNA.231-201ENST00000364358 102 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RNU6-1106P-201ENST00000390845 107 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RN7SKP61-201ENST00000410642 295 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RNU2-48P-201ENST00000410694 191 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RNU6-1068P-201ENST00000410958 103 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 USP9YP27-201ENST00000418455 438 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RPL23AP95-201ENST00000426806 265 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC096638.1-201ENST00000444678 216 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 RPS29P21-201ENST00000496272 170 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 HMGB1P35-201ENST00000503360 598 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AK6P1-201ENST00000540219 478 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AP000763.2-201ENST00000540641 163 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 MYL12BP1-201ENST00000569826 507 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 MIR4648-201ENST00000580107 72 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 DISC2.1-201ENST00000612827 205 ntBASIC2.52□□□□□ -2.01
SDF4Q9BRK5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDF4Q9BRK5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SDF4Q9BRK5 AC121333.1-201ENST00000567488 2709 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNU6-944P-201ENST00000364023 107 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 Y_RNA.372-201ENST00000365599 102 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNU2-32P-201ENST00000411193 191 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 AC244670.1-201ENST00000436879 112 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 AL031659.1-201ENST00000447075 539 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.51□□□□□ -2.01
SDF4Q9BRK5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.51□□□□□ -2.01
SDF4Q9BRK5 SNORA4.4-201ENST00000515921 135 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNU6-314P-201ENST00000516574 104 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
SDF4Q9BRK5 RNU7-193P-201ENST00000516723 65 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms