Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC117503.1-201ENST00000472241 394 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RPL36AP48-201ENST00000485521 314 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC010486.1-201ENST00000511793 424 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC114781.4-201ENST00000513707 639 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RNU2-69P-201ENST00000516061 100 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RNU4-49P-201ENST00000516080 140 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 MTND4P7-201ENST00000523876 130 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AP004607.1-201ENST00000524456 203 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AL137161.1-201ENST00000532231 390 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 MIR3616-201ENST00000584070 92 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 MIR3942-201ENST00000585264 109 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 Z82243.1-201ENST00000609432 473 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC024581.2-201ENST00000619986 252 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 RMST_7.1-201ENST00000621935 268 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 Z75746.1-201ENST00000440243 2080 ntBASIC1.92□□□□□ -2.1
EBF4Q9BQW3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
EBF4Q9BQW3 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 SNORA5B-201ENST00000363786 132 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 RNU1-91P-201ENST00000364746 163 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 RNA5SP219-201ENST00000390940 113 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC096664.2-201ENST00000411843 406 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 BX276092.3-201ENST00000424182 230 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 MTND5P20-201ENST00000448677 143 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 HMGB1P30-201ENST00000492455 606 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 Y_RNA.702-201ENST00000516843 96 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC079598.5-201ENST00000547460 117 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC026464.5-201ENST00000562497 722 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC023824.2-201ENST00000566185 400 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC105245.1-201ENST00000581934 244 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 VN1R80P-201ENST00000597126 338 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 Y_RNA.804-201ENST00000615262 101 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 AC009248.2-201ENST00000619826 254 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 MIR7157-201ENST00000635801 60 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
EBF4Q9BQW3 MTND5P30-201ENST00000452896 1731 ntBASIC1.91□□□□□ -2.1
EBF4Q9BQW3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
EBF4Q9BQW3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 CBX3P1-201ENST00000325243 554 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-486P-201ENST00000363116 107 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 SNORD81.2-201ENST00000365153 76 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-843P-201ENST00000384454 104 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-393P-201ENST00000384475 107 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 SNORD116-20-201ENST00000384529 92 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 POLHP1-201ENST00000411806 470 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC097463.2-201ENST00000421074 142 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 MTCO3P18-201ENST00000440206 761 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 FAM206BP-201ENST00000510179 541 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC104136.1-201ENST00000512969 394 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNA5SP112-201ENST00000515937 99 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 SNORA43.2-201ENST00000516652 128 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RNU6-273P-201ENST00000516937 96 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RAB11AP2-201ENST00000545905 639 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC090115.3-201ENST00000553218 849 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 MIR5571-201ENST00000577998 113 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC092747.3-201ENST00000603769 301 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC123912.5-201ENST00000605470 343 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 LARP7P1-201ENST00000605576 316 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC002044.1-201ENST00000606707 158 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC069294.1-201ENST00000608397 350 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC009233.1-201ENST00000616477 371 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC244517.12-201ENST00000623581 663 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 SCARNA4-202ENST00000625402 129 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 AC112487.2-201ENST00000637950 304 ntBASIC1.9□□□□□ -2.11
EBF4Q9BQW3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
EBF4Q9BQW3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms