Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC011155.2-201ENST00000623202 216 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
NPAS2Q99743 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS2Q99743 RNU6-1097P-201ENST00000363586 107 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 MIR454-201ENST00000390180 115 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AL033519.2-201ENST00000403958 392 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 OR6C66P-201ENST00000414917 930 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NPAS2Q99743 EIF4EP2-201ENST00000422816 654 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 RPS15AP10-201ENST00000432472 382 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC132479.1-201ENST00000449160 144 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 RPL30P12-201ENST00000474666 353 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 MTND2P33-201ENST00000506452 1031 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 MTND3P25-201ENST00000509243 135 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS2Q99743 RN7SKP298-201ENST00000515950 94 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS2Q99743 MIR4775-201ENST00000581168 75 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS2Q99743 BNIP3P25-201ENST00000596023 559 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.77□□□□□ -2.13
NPAS2Q99743 AC073648.5-201ENST00000603502 305 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC025449.1-201ENST00000603896 529 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AC004908.3-201ENST00000610248 625 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS2Q99743 Z69720.2-201ENST00000624755 279 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS2Q99743 U6.114-201ENST00000636407 96 ntBASIC1.77□□□□□ -2.13
NPAS2Q99743 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS2Q99743 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS2Q99743 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS2Q99743 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NPAS2Q99743 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
NPAS2Q99743 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NPAS2Q99743 snoU2_19.1-201ENST00000362361 80 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 SNORD115-3-201ENST00000363100 82 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 Y_RNA.159-201ENST00000363674 87 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 Y_RNA.381-201ENST00000365666 102 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 RNU6-1029P-201ENST00000384109 107 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 RNU6-1119P-201ENST00000384349 108 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NPAS2Q99743 RNU6-550P-201ENST00000391057 101 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.76□□□□□ -2.13
NPAS2Q99743 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.76□□□□□ -2.13
NPAS2Q99743 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.76□□□□□ -2.13
NPAS2Q99743 AL591043.1-201ENST00000432461 424 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 RPL39P29-201ENST00000447779 157 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC104136.1-201ENST00000512969 394 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.76□□□□□ -2.13
NPAS2Q99743 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 RN7SKP219-201ENST00000516825 296 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AP002963.1-201ENST00000530590 184 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.76□□□□□ -2.13
NPAS2Q99743 AC068790.2-201ENST00000602601 557 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC078795.2-201ENST00000602835 1252 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 AC009161.2-201ENST00000624626 138 ntBASIC1.76□□□□□ -2.13
NPAS2Q99743 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.75□□□□□ -2.13
NPAS2Q99743 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NPAS2Q99743 RNU6-1287P-201ENST00000362914 107 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 RNU6-1222P-201ENST00000384615 107 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 RNU6-1060P-201ENST00000384664 107 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 CYCSP33-201ENST00000414485 327 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.75□□□□□ -2.13
NPAS2Q99743 BX510359.4-201ENST00000423750 193 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 UBE2V1P4-201ENST00000425374 344 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.75□□□□□ -2.13
NPAS2Q99743 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
NPAS2Q99743 MTND1P29-201ENST00000448112 647 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 RNU7-182P-201ENST00000459009 62 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 AC074344.1-201ENST00000512823 224 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 RNA5SP503-201ENST00000517047 117 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
NPAS2Q99743 AC115990.1-201ENST00000526957 301 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
NPAS2Q99743 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.75□□□□□ -2.13
NPAS2Q99743 AC007375.1-201ENST00000554513 578 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.75□□□□□ -2.13
NPAS2Q99743 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 NBR2-204ENST00000587322 63 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 U1.36-201ENST00000620684 176 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 U4.7-201ENST00000638126 106 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
NPAS2Q99743 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms