Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.1□□□□□ -1.75
HHIPQ96QV1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
HHIPQ96QV1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HHIPQ96QV1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 SNORA60-201ENST00000362396 134 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 Y_RNA.23-201ENST00000362496 106 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 Y_RNA.343-201ENST00000365354 112 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AL512633.1-201ENST00000399931 655 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC019205.3-201ENST00000424573 156 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AL353748.1-201ENST00000440753 474 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC009237.7-201ENST00000447357 229 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 PRSS3P4-201ENST00000453323 162 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 RN7SL323P-201ENST00000494712 295 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 RPL29P14-201ENST00000495837 428 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 ACA59.2-201ENST00000517061 156 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC006199.1-201ENST00000548728 219 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC084757.4-201ENST00000616350 526 ntBASIC4.09□□□□□ -1.75
HHIPQ96QV1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.09□□□□□ -1.75
HHIPQ96QV1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HHIPQ96QV1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HHIPQ96QV1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HHIPQ96QV1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 Y_RNA.7-201ENST00000362352 102 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 Y_RNA.101-201ENST00000363154 102 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 RNU6-525P-201ENST00000363685 104 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 ELOCP21-201ENST00000412558 336 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 AL591419.1-201ENST00000427423 339 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 RBBP8P1-201ENST00000449447 1844 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 RNU6-581P-201ENST00000516214 105 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HHIPQ96QV1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 SNRPGP20-201ENST00000604477 205 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 AC004467.1-201ENST00000615678 330 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 AC009093.8-201ENST00000641769 292 ntBASIC4.08□□□□□ -1.76
HHIPQ96QV1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HHIPQ96QV1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HHIPQ96QV1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HHIPQ96QV1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.08□□□□□ -1.76
HHIPQ96QV1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNA5SP119-201ENST00000362715 117 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU6-799P-201ENST00000363567 107 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 SNORD35B-201ENST00000363660 87 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU6-449P-201ENST00000383914 107 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 SNORA1.3-201ENST00000384676 136 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU2-51P-201ENST00000410708 197 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU5E-9P-201ENST00000411164 104 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU6-1199P-201ENST00000411249 104 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AC099548.1-201ENST00000421443 426 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 IFNA11P-201ENST00000446352 526 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AC091179.3-201ENST00000474761 144 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AC025554.1-201ENST00000505641 188 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU6-155P-201ENST00000516347 100 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 RNU6-479P-201ENST00000516348 105 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 HIGD1AP1-201ENST00000550979 275 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 AL391261.4-201ENST00000616012 481 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AL034408.1-202ENST00000636088 415 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 MIR3674-201ENST00000636576 68 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 CUL1P1-201ENST00000509510 2425 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 AL672296.1-201ENST00000427780 2158 ntBASIC4.07□□□□□ -1.76
HHIPQ96QV1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HHIPQ96QV1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HHIPQ96QV1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.06□□□□□ -1.76
HHIPQ96QV1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HHIPQ96QV1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.06□□□□□ -1.76
HHIPQ96QV1 Y_RNA.75-201ENST00000362927 97 ntBASIC4.06□□□□□ -1.76
HHIPQ96QV1 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms