Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 SNORD50.1-201ENST00000362987 71 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.350-201ENST00000365409 98 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 SNORD21-201ENST00000383953 95 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.552-201ENST00000384665 112 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.592-201ENST00000410274 109 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 PRSS3P4-201ENST00000453323 162 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 SNORD127-201ENST00000458892 86 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 snoU109.2-201ENST00000459316 135 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC034236.1-201ENST00000469891 373 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC003982.1-202ENST00000469928 248 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 SNORA9.3-201ENST00000516383 129 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 TRAV28-201ENST00000557548 323 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC008962.1-201ENST00000605729 304 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AL162274.2-201ENST00000614406 332 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC090617.7-201ENST00000623952 126 ntBASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PDLIM2Q96JY6 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.89
PDLIM2Q96JY6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 RNU6-1026P-201ENST00000384465 108 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 ARL5AP4-201ENST00000430731 512 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC009237.8-201ENST00000445492 379 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 FCF1P4-201ENST00000448326 183 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC087190.1-201ENST00000484462 480 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 Y_RNA.680-201ENST00000516441 93 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 RNU6-911P-201ENST00000516523 104 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AL356575.1-201ENST00000603008 283 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC024220.1-201ENST00000603675 484 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC130454.1-201ENST00000622948 401 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AC099506.2-201ENST00000623074 221 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 U6.99-201ENST00000637524 83 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 AL359693.1-201ENST00000614959 2407 ntBASIC3.21□□□□□ -1.9
PDLIM2Q96JY6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RNU6-708P-201ENST00000384217 107 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RNU2-38P-201ENST00000410856 79 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RPL21P66-201ENST00000426566 466 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 SNRPEP9-201ENST00000436794 238 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC013470.1-201ENST00000453438 462 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC117440.1-201ENST00000474107 571 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 RPL30P10-201ENST00000488148 337 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC023141.12-201ENST00000512399 199 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC109329.1-201ENST00000518744 317 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AL590705.4-201ENST00000532209 134 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 MIR3128-201ENST00000581957 66 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 AC007785.2-201ENST00000598627 1916 ntBASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM2Q96JY6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 RNU6-227P-201ENST00000362865 103 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 RNU1-33P-201ENST00000364249 162 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 SNORA7.2-201ENST00000364446 145 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 Y_RNA.477-201ENST00000384352 108 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 MIR325-201ENST00000385260 98 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 AC098614.2-201ENST00000426040 255 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 AC079354.2-201ENST00000453523 154 ntBASIC3.19□□□□□ -1.9
PDLIM2Q96JY6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms