Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RAP1BP3-201ENST00000407180 549 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RNU6-1148P-201ENST00000410992 104 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 POLHP1-201ENST00000411806 470 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 CYCSP33-201ENST00000414485 327 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AIMP1P2-201ENST00000425294 312 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RNU7-66P-201ENST00000459469 62 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 MTCO2P30-201ENST00000503662 364 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RPL23AP94-201ENST00000512518 302 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RNU1-86P-201ENST00000516108 154 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 RNU1-107P-201ENST00000516617 154 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 SNORA20.3-201ENST00000516880 132 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 SNRPGP18-201ENST00000553000 214 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AC018638.8-201ENST00000588755 281 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 BNIP3P25-201ENST00000596023 559 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 AL121917.1-203ENST00000605534 577 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.28□□□□□ -2.04
RTL3Q8N8U3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.28□□□□□ -2.04
RTL3Q8N8U3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 Y_RNA.279-201ENST00000364763 95 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 RNU6-332P-201ENST00000391193 108 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL356776.1-201ENST00000406574 447 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC138393.2-201ENST00000414742 246 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 MTND3P25-201ENST00000509243 135 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 FAM206BP-201ENST00000510179 541 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC010486.1-201ENST00000511793 424 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 SNORA25.17-201ENST00000517184 124 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 RNU6-586P-201ENST00000517265 104 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC023050.3-201ENST00000541142 333 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 PRELID2P1-201ENST00000552837 301 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC078899.2-201ENST00000595282 212 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 VN1R80P-201ENST00000597126 338 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AL670379.2-201ENST00000604983 252 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 AC090617.10-201ENST00000624308 134 ntBASIC2.27□□□□□ -2.05
RTL3Q8N8U3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RTL3Q8N8U3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 Y_RNA.480-201ENST00000384364 102 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AL355497.1-201ENST00000406262 551 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 SNORA3.2-201ENST00000408221 125 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 Y_RNA.615-201ENST00000410769 117 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AL135786.1-201ENST00000415892 214 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC008267.5-201ENST00000424928 265 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AL121601.2-201ENST00000438019 707 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 PRPS1P1-201ENST00000445305 876 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC008549.1-201ENST00000512900 643 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 RNU6-189P-201ENST00000516120 101 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 RNU6-1038P-201ENST00000516516 104 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 SNORA43.2-201ENST00000516652 128 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC026464.5-201ENST00000562497 722 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC093249.1-201ENST00000567049 203 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 BNIP3P10-201ENST00000605360 577 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 U2.17-201ENST00000611454 95 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC064859.1-201ENST00000624741 174 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC090517.3-201ENST00000625170 141 ntBASIC2.26□□□□□ -2.05
RTL3Q8N8U3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
RTL3Q8N8U3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
RTL3Q8N8U3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTL3Q8N8U3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTL3Q8N8U3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTL3Q8N8U3 RNU6-655P-201ENST00000362858 107 ntBASIC2.25□□□□□ -2.05
RTL3Q8N8U3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 299.8 ms