Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MIR4513-201ENST00000581077 86 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 MIR4273-201ENST00000582824 84 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 VN1R107P-201ENST00000601784 209 ntBASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBE3BQ7Z3V4 FAM35BP-202ENST00000497389 3337 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-859P-201ENST00000362728 107 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-428P-201ENST00000362942 107 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-270P-201ENST00000364131 105 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AL356057.3-201ENST00000402607 340 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AL451074.5-201ENST00000415894 435 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC112220.1-201ENST00000434628 355 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 snoU109.2-201ENST00000459316 135 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 RPS29P27-201ENST00000463711 170 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC090525.1-201ENST00000479116 478 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AK3P2-201ENST00000507976 429 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AP005902.1-201ENST00000521358 186 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AL117187.1-201ENST00000555482 181 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 MIR4506-201ENST00000584693 77 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC092447.9-201ENST00000603395 144 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 MIR6134-201ENST00000617606 109 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AL078596.1-201ENST00000624856 447 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.42□□□□□ -1.86
UBE3BQ7Z3V4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-942P-201ENST00000363002 107 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 Y_RNA.144-201ENST00000363521 113 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-884P-201ENST00000363889 107 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-336P-201ENST00000364891 107 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-658P-201ENST00000384606 106 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU1-101P-201ENST00000391171 127 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 MIR548F4-201ENST00000408515 105 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 MRPS18CP6-201ENST00000423587 223 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RPS29P6-201ENST00000438196 145 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 FO393415.2-201ENST00000480085 343 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 SNORD59.2-201ENST00000516873 68 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 RNU6-612P-201ENST00000516909 102 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 AP004607.1-201ENST00000524456 203 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 AC010653.1-201ENST00000571108 881 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 AL158827.2-201ENST00000602494 330 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 AL691447.3-201ENST00000635020 330 ntBASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
UBE3BQ7Z3V4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.4□□□□□ -1.86
UBE3BQ7Z3V4 RNY1P16-201ENST00000363063 111 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 SNORA1.3-201ENST00000384676 136 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 MIR196B-201ENST00000384852 84 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 MIR521-1-201ENST00000384902 87 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 RNU2-23P-201ENST00000410545 195 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC015911.1-201ENST00000495111 156 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-764P-201ENST00000516396 105 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 RNU4-77P-201ENST00000516692 156 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 MIR6076-201ENST00000617521 113 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AL162373.1-201ENST00000620433 407 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 AC005592.1-201ENST00000566527 1640 ntBASIC3.4□□□□□ -1.87
UBE3BQ7Z3V4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 MIR26A1-201ENST00000362205 77 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.48-201ENST00000362710 103 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-105P-201ENST00000363909 104 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 RN7SKP123-201ENST00000410732 291 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 BTF3P15-201ENST00000455606 336 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 AC128713.1-201ENST00000471495 306 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 RPS27AP10-201ENST00000496103 208 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 RNA5SP385-201ENST00000515947 110 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 SNORA43.2-201ENST00000516652 128 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms