Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 EDDM3CP-201ENST00000415977 425 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC009161.1-201ENST00000417306 376 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RPL39P29-201ENST00000447779 157 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RNU7-66P-201ENST00000459469 62 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RPL30P12-201ENST00000474666 353 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC004486.1-201ENST00000546846 233 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC107304.1-201ENST00000604229 296 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 CTHRC1P1-201ENST00000605383 469 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AC090617.10-201ENST00000624308 134 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 RNU1-72P-201ENST00000362976 153 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 RNU6-128P-201ENST00000383976 107 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 RNU6-214P-201ENST00000384130 107 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 SNORA40.19-201ENST00000390846 128 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AL445529.1-201ENST00000398713 389 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC008267.5-201ENST00000424928 265 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AIMP1P2-201ENST00000425294 312 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 UBE2V1P4-201ENST00000425374 344 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 SNAP23P1-201ENST00000433229 246 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 RNU2-53P-201ENST00000516257 147 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC091135.1-201ENST00000585943 307 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AL356157.2-201ENST00000605122 111 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC006504.8-201ENST00000621046 635 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
NUP54Q7Z3B4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
NUP54Q7Z3B4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 RNU6-212P-201ENST00000362642 104 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 Y_RNA.414-201ENST00000384011 101 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AC008628.2-201ENST00000502605 298 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1314P-201ENST00000517139 104 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AF235103.2-201ENST00000525753 346 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AL713866.2-201ENST00000603579 219 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 ELOCP5-201ENST00000604924 333 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AC064836.2-201ENST00000609491 462 ntBASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUP54Q7Z3B4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RNU6-655P-201ENST00000362858 107 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 Y_RNA.248-201ENST00000364501 109 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RNU6-692P-201ENST00000384496 107 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 VN1R36P-201ENST00000414936 291 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AL513185.2-201ENST00000425543 193 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 NFU1P2-201ENST00000448700 469 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AL121594.1-201ENST00000475906 575 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC107032.1-201ENST00000485945 480 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC092436.3-201ENST00000511788 257 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1332P-201ENST00000516666 104 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RNU2-19P-201ENST00000517288 84 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC115990.1-201ENST00000526957 301 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC026271.5-201ENST00000577873 130 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 RPL30P11-203ENST00000598995 310 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC100810.6-201ENST00000638068 285 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms