Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC138305.3-201ENST00000624988 240 ntBASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 AC241585.2-209ENST00000638217 143 ntBASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 ZNF299P-201ENST00000406845 1804 ntBASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
C9orf139Q6ZV77 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 RNU6-527P-201ENST00000363425 104 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 SNORD56.3-201ENST00000363507 71 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.144-201ENST00000363521 113 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 RNU6-784P-201ENST00000384330 106 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 FTH1P15-201ENST00000406984 280 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR548F4-201ENST00000408515 105 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC096644.2-201ENST00000429278 159 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 RPL23AP22-201ENST00000437556 453 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC243964.1-201ENST00000441814 261 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 HMGN2P10-201ENST00000448085 265 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MTATP8P1-201ENST00000467115 207 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC128713.1-201ENST00000471495 306 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC114801.2-201ENST00000503825 781 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 RNU6-581P-201ENST00000516214 105 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 GNAI2P1-201ENST00000541815 315 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC021739.1-201ENST00000559631 174 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 VN1R107P-201ENST00000601784 209 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR7106-201ENST00000612419 65 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR1244-1-201ENST00000612829 85 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC006386.2-201ENST00000624491 75 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC012005.1-201ENST00000624575 75 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AL078596.1-201ENST00000624856 447 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AL606534.2-204ENST00000635008 178 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR1244-3-201ENST00000635744 85 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR4272-201ENST00000635924 64 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR1244-2-201ENST00000636449 85 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MIR1244-4-202ENST00000636813 85 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MTND5P7-201ENST00000413558 1798 ntBASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
C9orf139Q6ZV77 AC110491.1-201ENST00000562191 2010 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 ZNF72P-201ENST00000425869 1908 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.123-201ENST00000363338 102 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.153-201ENST00000363615 91 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 RNU4-42P-201ENST00000364738 142 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 SNORD116-20-201ENST00000384529 92 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 MIR568-201ENST00000385036 95 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 SNORA11.2-201ENST00000408318 127 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 MIR1289-1-201ENST00000408836 144 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 RNA5SP293-201ENST00000410527 113 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 HMGB3P2-201ENST00000411913 584 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AP000275.1-201ENST00000411943 390 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AL714022.1-201ENST00000439897 151 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AC112492.4-201ENST00000456549 352 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 RPS27P29-201ENST00000463110 252 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 MRPL42P6-201ENST00000486397 371 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 RPL23AP49-201ENST00000492925 468 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AC010186.2-204ENST00000537668 439 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 CR383656.8-201ENST00000549046 145 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 NACAP3-201ENST00000552100 481 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 AC087588.2-201ENST00000617667 426 ntBASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.49□□□□□ -2.01
C9orf139Q6ZV77 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AC096644.4-201ENST00000563417 2912 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 MIR22-201ENST00000362190 85 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.39-201ENST00000362620 98 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 RNU6-450P-201ENST00000364654 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 RNU6-1280P-201ENST00000365211 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 RNU6-26P-201ENST00000383985 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.455-201ENST00000384230 98 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 RNU6-574P-201ENST00000384265 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 RNU6-851P-201ENST00000384565 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 Y_RNA.557-201ENST00000384680 107 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AL139281.1-201ENST00000422120 335 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 MTCYBP10-201ENST00000424905 650 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.48□□□□□ -2.01
C9orf139Q6ZV77 AC006026.2-201ENST00000457376 180 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms