Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AC092268.1-201ENST00000342691 405 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.39-201ENST00000362620 98 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RNU6-1010P-201ENST00000362757 107 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.80-201ENST00000362996 102 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RNA5SP139-201ENST00000364340 117 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 SNORA12.2-201ENST00000391040 156 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL133475.1-201ENST00000404414 305 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RN7SKP58-201ENST00000411010 305 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AC244670.1-201ENST00000436879 112 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 SNRPGP7-201ENST00000469016 106 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RPL30P1-201ENST00000488676 339 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RNU6-475P-201ENST00000516073 104 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AC115990.1-201ENST00000526957 301 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AC007375.1-201ENST00000554513 578 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 MIR5571-201ENST00000577998 113 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 RPL23AP88-201ENST00000605759 454 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL159153.1-201ENST00000619688 317 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 SCARNA4-201ENST00000629045 128 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AP000560.1-201ENST00000624150 1937 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 SNORD114-19-201ENST00000363072 75 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 SNORA29-201ENST00000384183 140 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.504-201ENST00000384481 104 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 CYCSP48-201ENST00000417124 323 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AL358453.1-201ENST00000422522 250 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC092423.1-201ENST00000430165 186 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 GPM6BP3-201ENST00000442797 145 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AL353705.4-201ENST00000449661 238 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 snoU13.30-201ENST00000458951 104 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC110794.1-201ENST00000505816 425 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC087588.2-201ENST00000617667 426 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AL138825.1-201ENST00000618587 192 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC005592.1-201ENST00000566527 1640 ntBASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KHDC1Q4VXA5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC138623.1-201ENST00000418060 216 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AP001324.2-201ENST00000461163 319 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 RN7SL807P-201ENST00000470923 297 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC015911.1-201ENST00000495111 156 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 RNU6-1137P-201ENST00000517073 99 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MIR4680-201ENST00000580906 66 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AL161756.2-201ENST00000604597 246 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC100812.1-201ENST00000607622 580 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 AC138305.3-201ENST00000624988 240 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
KHDC1Q4VXA5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
KHDC1Q4VXA5 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.9
KHDC1Q4VXA5 RNA5SP374-201ENST00000362939 125 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 SNORD115-32-201ENST00000364079 82 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RNU4-42P-201ENST00000364738 142 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 SNORA69.1-201ENST00000390904 137 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 SNORA26.3-201ENST00000391119 136 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 MIR190B-201ENST00000401119 79 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms