Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX4Q06945 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX4Q06945 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX4Q06945 AC092593.1-201ENST00000515413 1815 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX4Q06945 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX4Q06945 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SOX4Q06945 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX4Q06945 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX4Q06945 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX4Q06945 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX4Q06945 Y_RNA.101-201ENST00000363154 102 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 Y_RNA.215-201ENST00000364204 112 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 MIR3074-201ENST00000384885 81 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 MIR449B-201ENST00000384995 97 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 Y_RNA.586-201ENST00000391146 98 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AL357075.1-201ENST00000404107 726 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 RN7SKP61-201ENST00000410642 295 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 HMGN2P30-201ENST00000423237 256 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AC112220.1-201ENST00000434628 355 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX4Q06945 RPS15AP5-201ENST00000436276 388 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AP000705.1-201ENST00000454567 350 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 RNU6-625P-201ENST00000459412 107 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX4Q06945 RNU6-1282P-201ENST00000516735 96 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX4Q06945 SUMO2P18-201ENST00000518873 252 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX4Q06945 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
SOX4Q06945 MIR3922-201ENST00000585192 84 ntBASIC4.02□□□□□ -1.77
SOX4Q06945 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX4Q06945 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX4Q06945 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX4Q06945 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOX4Q06945 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX4Q06945 MTND5P35-201ENST00000557537 1720 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SOX4Q06945 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SOX4Q06945 RNU5F-3P-201ENST00000363767 117 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 Y_RNA.238-201ENST00000364441 102 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 MIR93-201ENST00000385024 80 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 FTH1P15-201ENST00000406984 280 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 RNU2-2P-201ENST00000410396 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC078809.1-201ENST00000427601 140 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.01□□□□□ -1.77
SOX4Q06945 RPL37P4-201ENST00000448908 268 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC091153.1-201ENST00000466297 402 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 CYCSP23-201ENST00000519781 313 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX4Q06945 AC008011.1-201ENST00000545989 227 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX4Q06945 AC018448.1-201ENST00000552843 316 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 RNU2-4P-201ENST00000606190 192 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AL008718.3-201ENST00000610217 321 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.15-201ENST00000611544 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.16-201ENST00000613119 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.12-201ENST00000613778 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.9-201ENST00000615427 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AC004467.1-201ENST00000615678 330 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.11-201ENST00000616345 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.2-201ENST00000616535 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.3-201ENST00000617785 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.19-201ENST00000618602 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 RNU2-1-201ENST00000618664 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.6-201ENST00000619225 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.5-201ENST00000619465 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 U2.10-201ENST00000620268 191 ntBASIC4.01□□□□□ -1.77
SOX4Q06945 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX4Q06945 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SOX4Q06945 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX4Q06945 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOX4Q06945 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.01□□□□□ -1.77
SOX4Q06945 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX4Q06945 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SOX4Q06945 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX4Q06945 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SOX4Q06945 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SOX4Q06945 Y_RNA.23-201ENST00000362496 106 ntBASIC4□□□□□ -1.77
SOX4Q06945 RNA5SP119-201ENST00000362715 117 ntBASIC4□□□□□ -1.77
SOX4Q06945 Y_RNA.357-201ENST00000365487 109 ntBASIC4□□□□□ -1.77
SOX4Q06945 Y_RNA.412-201ENST00000384001 104 ntBASIC4□□□□□ -1.77
SOX4Q06945 Y_RNA.498-201ENST00000384460 102 ntBASIC4□□□□□ -1.77
SOX4Q06945 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4□□□□□ -1.77
SOX4Q06945 BTF3P11-201ENST00000426582 477 ntBASIC4□□□□□ -1.77
SOX4Q06945 HMGN2P21-201ENST00000447764 270 ntBASIC4□□□□□ -1.77
SOX4Q06945 TRBV12-2-201ENST00000489763 344 ntBASIC4□□□□□ -1.77
SOX4Q06945 RPL30P5-201ENST00000494923 336 ntBASIC4□□□□□ -1.77
SOX4Q06945 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4□□□□□ -1.77
SOX4Q06945 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4□□□□□ -1.77
SOX4Q06945 SNORA31.23-201ENST00000517219 133 ntBASIC4□□□□□ -1.77
SOX4Q06945 AC021231.3-201ENST00000558497 370 ntBASIC4□□□□□ -1.77
SOX4Q06945 AC024220.1-201ENST00000603675 484 ntBASIC4□□□□□ -1.77
SOX4Q06945 AC012468.1-201ENST00000604888 430 ntBASIC4□□□□□ -1.77
SOX4Q06945 AL359198.2-201ENST00000611836 194 ntBASIC4□□□□□ -1.77
SOX4Q06945 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4□□□□□ -1.77
SOX4Q06945 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SOX4Q06945 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms