Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM6P62312 RPS25P9-201ENST00000435591 252 ntBASIC0.68□□□□□ -2.3
LSM6P62312 AC099677.2-201ENST00000436385 175 ntBASIC0.68□□□□□ -2.3
LSM6P62312 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.68□□□□□ -2.3
LSM6P62312 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
LSM6P62312 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
LSM6P62312 MIR548AC-201ENST00000585049 88 ntBASIC0.68□□□□□ -2.3
LSM6P62312 AC072039.2-201ENST00000608883 439 ntBASIC0.68□□□□□ -2.3
LSM6P62312 AC131235.4-201ENST00000609288 620 ntBASIC0.68□□□□□ -2.3
LSM6P62312 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM6P62312 AL159152.1-201ENST00000635019 2587 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR340-201ENST00000362125 95 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR337-201ENST00000362281 93 ntBASIC0.67□□□□□ -2.3
LSM6P62312 RNY4P24-201ENST00000362735 96 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR515-2-201ENST00000384883 83 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR515-1-201ENST00000384884 83 ntBASIC0.67□□□□□ -2.3
LSM6P62312 HMGN1P14-201ENST00000412459 517 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
LSM6P62312 RPL23AP30-201ENST00000432419 501 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AL591043.1-201ENST00000432461 424 ntBASIC0.67□□□□□ -2.3
LSM6P62312 SNRPEP8-201ENST00000442866 260 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AC007327.1-201ENST00000447461 264 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
LSM6P62312 RN7SKP265-201ENST00000516448 223 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR3136-201ENST00000583498 78 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AL034555.1-201ENST00000604816 211 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR3976-201ENST00000606807 139 ntBASIC0.67□□□□□ -2.3
LSM6P62312 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.67□□□□□ -2.3
LSM6P62312 AC108706.1-201ENST00000611053 297 ntBASIC0.67□□□□□ -2.3
LSM6P62312 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
LSM6P62312 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.66□□□□□ -2.3
LSM6P62312 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LSM6P62312 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
LSM6P62312 RNU6-862P-201ENST00000362804 105 ntBASIC0.66□□□□□ -2.3
LSM6P62312 RNU6-511P-201ENST00000363496 107 ntBASIC0.66□□□□□ -2.3
LSM6P62312 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
LSM6P62312 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
LSM6P62312 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.66□□□□□ -2.3
LSM6P62312 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.66□□□□□ -2.3
LSM6P62312 AL008629.1-201ENST00000438615 184 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC007969.2-201ENST00000441891 191 ntBASIC0.66□□□□□ -2.3
LSM6P62312 MTND1P18-201ENST00000448191 573 ntBASIC0.66□□□□□ -2.3
LSM6P62312 MTND3P5-201ENST00000512798 333 ntBASIC0.66□□□□□ -2.3
LSM6P62312 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.66□□□□□ -2.3
LSM6P62312 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.66□□□□□ -2.3
LSM6P62312 MIR3146-201ENST00000580367 79 ntBASIC0.66□□□□□ -2.3
LSM6P62312 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC144521.1-201ENST00000607148 956 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AL512427.1-201ENST00000618593 349 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC026585.1-201ENST00000619582 524 ntBASIC0.66□□□□□ -2.3
LSM6P62312 AC068647.2-201ENST00000637380 353 ntBASIC0.66□□□□□ -2.3
LSM6P62312 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
LSM6P62312 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LSM6P62312 RNU6-1123P-201ENST00000362347 106 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU4-15P-201ENST00000362613 141 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU1-96P-201ENST00000364163 162 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU6-142P-201ENST00000384019 107 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU6-413P-201ENST00000384115 107 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU6-331P-201ENST00000384724 107 ntBASIC0.65□□□□□ -2.31
LSM6P62312 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
LSM6P62312 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.65□□□□□ -2.31
LSM6P62312 AC010099.3-201ENST00000423896 409 ntBASIC0.65□□□□□ -2.31
LSM6P62312 GTF2IP13-201ENST00000438487 386 ntBASIC0.65□□□□□ -2.31
LSM6P62312 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.65□□□□□ -2.31
LSM6P62312 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM6P62312 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.65□□□□□ -2.31
LSM6P62312 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM6P62312 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.65□□□□□ -2.31
LSM6P62312 MIR4709-201ENST00000577272 72 ntBASIC0.65□□□□□ -2.31
LSM6P62312 MTCO2P2-201ENST00000591258 225 ntBASIC0.65□□□□□ -2.31
LSM6P62312 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LSM6P62312 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LSM6P62312 RNA5SP432-201ENST00000362480 116 ntBASIC0.64□□□□□ -2.31
LSM6P62312 RNA5SP259-201ENST00000365541 109 ntBASIC0.64□□□□□ -2.31
LSM6P62312 SNORA32.2-201ENST00000384049 122 ntBASIC0.64□□□□□ -2.31
LSM6P62312 RNU6-769P-201ENST00000384407 104 ntBASIC0.64□□□□□ -2.31
LSM6P62312 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
LSM6P62312 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
LSM6P62312 MTCYBP39-201ENST00000437562 491 ntBASIC0.64□□□□□ -2.31
LSM6P62312 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.64□□□□□ -2.31
LSM6P62312 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AC034244.1-201ENST00000507687 207 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AF131216.2-201ENST00000512316 564 ntBASIC0.64□□□□□ -2.31
LSM6P62312 SNORA31.4-201ENST00000516049 129 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AC011979.2-201ENST00000527568 352 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.64□□□□□ -2.31
LSM6P62312 AC008015.1-201ENST00000555505 465 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AC008088.1-201ENST00000580993 280 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AC008751.2-201ENST00000597885 980 ntBASIC0.64□□□□□ -2.31
LSM6P62312 AL512506.1-201ENST00000613918 449 ntBASIC0.64□□□□□ -2.31
LSM6P62312 RMST_7.1-201ENST00000621935 268 ntBASIC0.64□□□□□ -2.31
LSM6P62312 MIR96-201ENST00000362288 78 ntBASIC0.63□□□□□ -2.31
LSM6P62312 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
LSM6P62312 RNU6-1179P-201ENST00000384667 107 ntBASIC0.63□□□□□ -2.31
LSM6P62312 MIR544A-201ENST00000384855 91 ntBASIC0.63□□□□□ -2.31
LSM6P62312 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms