Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC107304.1-201ENST00000604229 296 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SPCS3P61009 AC040896.1-201ENST00000613819 479 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AP002782.1-201ENST00000623107 614 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC103706.2-201ENST00000638080 240 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AL445523.1-201ENST00000451184 1362 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 SNORA4.1-201ENST00000364263 144 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 RNU6-142P-201ENST00000384019 107 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 MIR19B1-201ENST00000384829 87 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SPCS3P61009 AL356776.1-201ENST00000406574 447 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 RN7SKP61-201ENST00000410642 295 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.69□□□□□ -2.3
SPCS3P61009 MTND5P2-201ENST00000442927 1142 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 RNU1-86P-201ENST00000516108 154 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 RNU1-107P-201ENST00000516617 154 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
SPCS3P61009 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.69□□□□□ -2.3
SPCS3P61009 ADI1P3-201ENST00000549509 470 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 AL158032.1-201ENST00000605401 106 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 AL021368.1-201ENST00000607490 540 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 SNORD98-201ENST00000636377 67 ntBASIC0.69□□□□□ -2.3
SPCS3P61009 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SPCS3P61009 RNY4P16-201ENST00000364768 94 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 RNU5E-7P-201ENST00000365290 117 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 RPL22P18-201ENST00000417197 377 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 MTND1P32-201ENST00000433043 938 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.68□□□□□ -2.3
SPCS3P61009 AL360271.2-201ENST00000447710 161 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.68□□□□□ -2.3
SPCS3P61009 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 RN7SKP219-201ENST00000516825 296 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 MTND2P7-201ENST00000521337 640 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AC107934.1-201ENST00000522215 217 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.68□□□□□ -2.3
SPCS3P61009 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.68□□□□□ -2.3
SPCS3P61009 AC099786.3-201ENST00000565735 1410 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 MIR3136-201ENST00000583498 78 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AL606834.3-201ENST00000602615 496 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 PART1_2.1-201ENST00000612397 250 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AC012409.4-201ENST00000612923 249 ntBASIC0.68□□□□□ -2.3
SPCS3P61009 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
SPCS3P61009 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.67□□□□□ -2.3
SPCS3P61009 RNU6-527P-201ENST00000363425 104 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 SNORD116.1-201ENST00000365628 92 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 MIR222-201ENST00000384992 110 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 MTCYBP2-201ENST00000407745 171 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AL353777.1-201ENST00000425552 326 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 RPS26P45-201ENST00000471748 340 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 RNU7-51P-201ENST00000516560 62 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 RNU6-201P-201ENST00000517100 61 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 SNORA70.22-201ENST00000517160 124 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 AC010376.1-201ENST00000522101 334 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.67□□□□□ -2.3
SPCS3P61009 AL442163.3-201ENST00000554110 156 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.67□□□□□ -2.3
SPCS3P61009 AC110760.3-201ENST00000598794 467 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 AP002360.4-201ENST00000606980 481 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
SPCS3P61009 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC073343.1-201ENST00000328239 651 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 SNORD31B-201ENST00000364977 69 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 MIR23A-201ENST00000385245 73 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AL117342.1-201ENST00000404861 406 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 COX6CP10-201ENST00000416832 224 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.66□□□□□ -2.3
SPCS3P61009 AC073910.1-201ENST00000445047 438 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 SNRPFP4-201ENST00000456366 242 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC016925.1-201ENST00000458303 298 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 TOMM22P6-201ENST00000465035 409 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.66□□□□□ -2.3
SPCS3P61009 RNU6-1003P-201ENST00000517099 105 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 RNU6-165P-201ENST00000517170 99 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.66□□□□□ -2.3
SPCS3P61009 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.66□□□□□ -2.3
SPCS3P61009 AP002453.2-201ENST00000533503 320 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 AC109446.1-201ENST00000566172 220 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 MIR4307-201ENST00000582802 84 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.66□□□□□ -2.3
SPCS3P61009 AC097372.5-201ENST00000623665 376 ntBASIC0.66□□□□□ -2.3
SPCS3P61009 RNU6-371P-201ENST00000364283 108 ntBASIC0.65□□□□□ -2.31
SPCS3P61009 RNU6-1257P-201ENST00000384625 110 ntBASIC0.65□□□□□ -2.31
SPCS3P61009 RPS20P2-201ENST00000402520 389 ntBASIC0.65□□□□□ -2.31
SPCS3P61009 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.65□□□□□ -2.31
SPCS3P61009 USP9YP14-201ENST00000430663 563 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms