Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL121772.2-201ENST00000614331 297 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 U4.6-201ENST00000621618 127 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC097372.5-201ENST00000623665 376 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
ERVFC1-1P60608 AC091903.1-201ENST00000624322 454 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.54□□□□□ -2
ERVFC1-1P60608 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ERVFC1-1P60608 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.54□□□□□ -2
ERVFC1-1P60608 AC233263.6-201ENST00000631132 1963 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1-1P60608 RNA5SP124-201ENST00000362739 110 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.64-201ENST00000362845 102 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-884P-201ENST00000363889 107 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-270P-201ENST00000364131 105 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.405-201ENST00000383979 100 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 SNORA5A-201ENST00000384111 134 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.451-201ENST00000384200 100 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.476-201ENST00000384347 108 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.524-201ENST00000384564 100 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 Y_RNA.561-201ENST00000384694 100 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 SNORA12.2-201ENST00000391040 156 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1-1P60608 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1-1P60608 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-130P-201ENST00000411112 103 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RPL26P27-201ENST00000414397 437 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.53□□□□□ -2
ERVFC1-1P60608 AL035423.1-201ENST00000420331 213 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.53□□□□□ -2
ERVFC1-1P60608 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1-1P60608 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1-1P60608 AL133162.1-201ENST00000463228 453 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC104564.1-201ENST00000493028 407 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-408P-201ENST00000515910 100 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-397P-201ENST00000516226 104 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.53□□□□□ -2
ERVFC1-1P60608 AC023157.2-201ENST00000540596 141 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1-1P60608 MIR4444-1-201ENST00000581696 74 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 MIR4444-2-201ENST00000584390 74 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC023043.3-201ENST00000593113 385 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC012442.3-202ENST00000636742 206 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC241585.2-209ENST00000638217 143 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 AC009093.8-201ENST00000641769 292 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
ERVFC1-1P60608 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.53□□□□□ -2
ERVFC1-1P60608 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 SNORA63.1-201ENST00000362493 131 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU1-70P-201ENST00000362618 164 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU4-50P-201ENST00000364361 141 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNA5SP72-201ENST00000364442 117 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 Y_RNA.461-201ENST00000384263 103 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 Y_RNA.483-201ENST00000384380 101 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 MIR218-2-201ENST00000385006 110 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 SNORA11.1-201ENST00000408133 129 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RAB9AP3-201ENST00000412737 573 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 HMGN2P30-201ENST00000423237 256 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 Z82188.1-201ENST00000436709 154 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 CYCSP32-201ENST00000440548 321 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RAB9AP1-201ENST00000449393 573 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RN7SKP210-201ENST00000459176 261 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC074250.1-201ENST00000511117 192 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU1-95P-201ENST00000516357 160 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 Y_RNA.680-201ENST00000516441 93 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU1-128P-201ENST00000516704 160 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU6-897P-201ENST00000517135 105 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AP004607.1-201ENST00000524456 203 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 AC020895.1-201ENST00000595362 272 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 RNU1-30P-201ENST00000606575 163 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 uc_338.1-201ENST00000612113 180 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 MIR6134-201ENST00000617606 109 ntBASIC2.52□□□□□ -2.01
ERVFC1-1P60608 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ERVFC1-1P60608 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.51□□□□□ -2.01
ERVFC1-1P60608 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ERVFC1-1P60608 Y_RNA.105-201ENST00000363182 111 ntBASIC2.51□□□□□ -2.01
ERVFC1-1P60608 RNU6-770P-201ENST00000363929 105 ntBASIC2.51□□□□□ -2.01
ERVFC1-1P60608 Y_RNA.376-201ENST00000365638 108 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms