Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.665-201ENST00000516177 98 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDL3P58872 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDL3P58872 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.01□□□□□ -1.93
RHBDL3P58872 AC018630.3-201ENST00000542637 96 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 AP002770.2-201ENST00000543613 532 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDL3P58872 SNORD53-201ENST00000579969 78 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.01□□□□□ -1.93
RHBDL3P58872 AL034555.1-201ENST00000604816 211 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 AC122108.2-201ENST00000611946 526 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 SNORD98-201ENST00000636377 67 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 MIR3688-2-201ENST00000636963 87 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 AC024614.3-201ENST00000637860 256 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.01□□□□□ -1.93
RHBDL3P58872 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 AC069528.2-201ENST00000624849 1991 ntBASIC3.01□□□□□ -1.93
RHBDL3P58872 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RHBDL3P58872 snoU2_19.1-201ENST00000362361 80 ntBASIC3□□□□□ -1.93
RHBDL3P58872 SNORA25B-201ENST00000365507 128 ntBASIC3□□□□□ -1.93
RHBDL3P58872 RNU6-546P-201ENST00000383991 107 ntBASIC3□□□□□ -1.93
RHBDL3P58872 SNORA3.2-201ENST00000408221 125 ntBASIC3□□□□□ -1.93
RHBDL3P58872 EIF1AXP1-201ENST00000419267 435 ntBASIC3□□□□□ -1.93
RHBDL3P58872 AL353752.1-201ENST00000454946 260 ntBASIC3□□□□□ -1.93
RHBDL3P58872 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3□□□□□ -1.93
RHBDL3P58872 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3□□□□□ -1.93
RHBDL3P58872 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3□□□□□ -1.93
RHBDL3P58872 SNORA31.15-201ENST00000516771 132 ntBASIC3□□□□□ -1.93
RHBDL3P58872 RNU6-612P-201ENST00000516909 102 ntBASIC3□□□□□ -1.93
RHBDL3P58872 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3□□□□□ -1.93
RHBDL3P58872 AC026371.1-201ENST00000551867 419 ntBASIC3□□□□□ -1.93
RHBDL3P58872 AC021231.3-201ENST00000558497 370 ntBASIC3□□□□□ -1.93
RHBDL3P58872 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3□□□□□ -1.93
RHBDL3P58872 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
RHBDL3P58872 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3□□□□□ -1.93
RHBDL3P58872 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RHBDL3P58872 ANKRD18EP-201ENST00000405487 2632 ntBASIC3□□□□□ -1.93
RHBDL3P58872 RNU6-227P-201ENST00000362865 103 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNU6-254P-201ENST00000363377 107 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNU6-534P-201ENST00000364877 106 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNU6-933P-201ENST00000384424 107 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNU1-148P-201ENST00000384472 162 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 Y_RNA.615-201ENST00000410769 117 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDL3P58872 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AC068781.1-201ENST00000488231 618 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNU6-1332P-201ENST00000516666 104 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 RNA5SP82-201ENST00000516707 92 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AC016256.1-201ENST00000547971 354 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 SCOCP1-201ENST00000554676 349 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 AC026271.5-201ENST00000577873 130 ntBASIC2.99□□□□□ -1.93
RHBDL3P58872 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.99□□□□□ -1.93
RHBDL3P58872 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDL3P58872 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RHBDL3P58872 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDL3P58872 RNU6-332P-201ENST00000391193 108 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 SNORD115-47-201ENST00000391226 86 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AL359511.1-201ENST00000402970 211 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 MIR1277-201ENST00000408536 78 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 RNU2-32P-201ENST00000411193 191 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDL3P58872 AL590135.1-201ENST00000422215 156 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC019205.3-201ENST00000424573 156 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDL3P58872 AC016700.2-201ENST00000446011 156 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDL3P58872 RPL9P9-202ENST00000466501 579 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC015911.1-201ENST00000495111 156 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 MTCO1P29-201ENST00000496868 288 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 RNA5SP24-201ENST00000516478 95 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC034114.1-201ENST00000520293 285 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC104576.1-201ENST00000524225 88 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDL3P58872 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.98□□□□□ -1.93
RHBDL3P58872 ELOCP5-201ENST00000604924 333 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 SNORD14A-201ENST00000606526 91 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 RMST_3.1-201ENST00000611651 109 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC245884.12-201ENST00000615364 59 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 AC064859.1-201ENST00000624741 174 ntBASIC2.98□□□□□ -1.93
RHBDL3P58872 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RHBDL3P58872 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDL3P58872 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDL3P58872 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDL3P58872 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDL3P58872 RNU1-23P-201ENST00000363361 144 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 RNA5SP210-201ENST00000391034 120 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 SNORA26.3-201ENST00000391119 136 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 MIR1261-201ENST00000408659 82 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 RNA5SP270-201ENST00000411361 118 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDL3P58872 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.97□□□□□ -1.93
RHBDL3P58872 AL031659.1-201ENST00000447075 539 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AC132942.1-201ENST00000486753 483 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDL3P58872 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
RHBDL3P58872 AC022616.8-201ENST00000533569 253 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms