Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.35□□□□□ -2.03
LHX1P48742 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.35□□□□□ -2.03
LHX1P48742 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.35□□□□□ -2.03
LHX1P48742 AC243964.1-201ENST00000441814 261 ntBASIC2.35□□□□□ -2.03
LHX1P48742 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.35□□□□□ -2.03
LHX1P48742 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
LHX1P48742 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.35□□□□□ -2.03
LHX1P48742 AC008526.1-201ENST00000509149 338 ntBASIC2.35□□□□□ -2.03
LHX1P48742 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.35□□□□□ -2.03
LHX1P48742 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.35□□□□□ -2.03
LHX1P48742 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
LHX1P48742 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.35□□□□□ -2.03
LHX1P48742 RPL30P11-203ENST00000598995 310 ntBASIC2.35□□□□□ -2.03
LHX1P48742 VN1R107P-201ENST00000601784 209 ntBASIC2.35□□□□□ -2.03
LHX1P48742 AL138963.2-201ENST00000605137 226 ntBASIC2.35□□□□□ -2.03
LHX1P48742 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LHX1P48742 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LHX1P48742 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LHX1P48742 HMGB1P24-202ENST00000615653 685 ntBASIC2.35□□□□□ -2.03
LHX1P48742 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
LHX1P48742 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
LHX1P48742 Y_RNA.40-201ENST00000362645 93 ntBASIC2.34□□□□□ -2.03
LHX1P48742 RNU6-655P-201ENST00000362858 107 ntBASIC2.34□□□□□ -2.03
LHX1P48742 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
LHX1P48742 RNU6-1222P-201ENST00000384615 107 ntBASIC2.34□□□□□ -2.03
LHX1P48742 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LHX1P48742 MIR1277-201ENST00000408536 78 ntBASIC2.34□□□□□ -2.03
LHX1P48742 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.03
LHX1P48742 CYCSP48-201ENST00000417124 323 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.34□□□□□ -2.03
LHX1P48742 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.34□□□□□ -2.03
LHX1P48742 AC003685.2-201ENST00000422795 395 ntBASIC2.34□□□□□ -2.03
LHX1P48742 RPS15AP10-201ENST00000432472 382 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
LHX1P48742 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.34□□□□□ -2.03
LHX1P48742 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.34□□□□□ -2.03
LHX1P48742 snoU13.14-201ENST00000459372 104 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.34□□□□□ -2.03
LHX1P48742 AP005597.4-201ENST00000526762 229 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.34□□□□□ -2.03
LHX1P48742 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.03
LHX1P48742 MIR3662-201ENST00000637030 95 ntBASIC2.34□□□□□ -2.03
LHX1P48742 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
LHX1P48742 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LHX1P48742 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LHX1P48742 RNU6-1210P-201ENST00000363775 107 ntBASIC2.33□□□□□ -2.04
LHX1P48742 U3.13-201ENST00000364804 214 ntBASIC2.33□□□□□ -2.04
LHX1P48742 RNU6-692P-201ENST00000384496 107 ntBASIC2.33□□□□□ -2.04
LHX1P48742 Y_RNA.599-201ENST00000410489 109 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.33□□□□□ -2.04
LHX1P48742 AL359672.1-201ENST00000442302 409 ntBASIC2.33□□□□□ -2.04
LHX1P48742 MTCO2P3-201ENST00000442543 421 ntBASIC2.33□□□□□ -2.04
LHX1P48742 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.33□□□□□ -2.04
LHX1P48742 CYP2C59P-201ENST00000457790 269 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AL121594.1-201ENST00000475906 575 ntBASIC2.33□□□□□ -2.04
LHX1P48742 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
LHX1P48742 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AP000889.2-201ENST00000532684 490 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AC093249.1-201ENST00000567049 203 ntBASIC2.33□□□□□ -2.04
LHX1P48742 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AC091135.1-201ENST00000585943 307 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AL713866.2-201ENST00000603579 219 ntBASIC2.33□□□□□ -2.04
LHX1P48742 AL159153.1-201ENST00000619688 317 ntBASIC2.33□□□□□ -2.04
LHX1P48742 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LHX1P48742 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LHX1P48742 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LHX1P48742 RNA5SP240-201ENST00000365355 128 ntBASIC2.32□□□□□ -2.04
LHX1P48742 RNU6-214P-201ENST00000384130 107 ntBASIC2.32□□□□□ -2.04
LHX1P48742 MIR450B-201ENST00000401182 78 ntBASIC2.32□□□□□ -2.04
LHX1P48742 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.32□□□□□ -2.04
LHX1P48742 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
LHX1P48742 RNA5SP118-201ENST00000410385 109 ntBASIC2.32□□□□□ -2.04
LHX1P48742 NDUFA5P4-201ENST00000436704 385 ntBASIC2.32□□□□□ -2.04
LHX1P48742 SNRPGP7-201ENST00000469016 106 ntBASIC2.32□□□□□ -2.04
LHX1P48742 RPS29P21-201ENST00000496272 170 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC008628.2-201ENST00000502605 298 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.32□□□□□ -2.04
LHX1P48742 AF213884.2-201ENST00000510417 903 ntBASIC2.32□□□□□ -2.04
LHX1P48742 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
LHX1P48742 RNU6-1332P-201ENST00000516666 104 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.32□□□□□ -2.04
LHX1P48742 AC104576.1-201ENST00000524225 88 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.32□□□□□ -2.04
LHX1P48742 AC146944.4-201ENST00000602697 718 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC009314.1-201ENST00000603871 304 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AP000907.4-201ENST00000604143 237 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AL670379.2-201ENST00000604983 252 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC104458.1-201ENST00000608243 463 ntBASIC2.32□□□□□ -2.04
LHX1P48742 AC007014.2-201ENST00000615581 479 ntBASIC2.32□□□□□ -2.04
LHX1P48742 U6atac.1-201ENST00000616025 117 ntBASIC2.32□□□□□ -2.04
LHX1P48742 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LHX1P48742 Y_RNA.100-201ENST00000363141 102 ntBASIC2.31□□□□□ -2.04
LHX1P48742 SNORD113-7-201ENST00000363762 77 ntBASIC2.31□□□□□ -2.04
LHX1P48742 RNU6-1329P-201ENST00000365664 107 ntBASIC2.31□□□□□ -2.04
LHX1P48742 Y_RNA.530-201ENST00000384587 101 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AIMP1P2-201ENST00000425294 312 ntBASIC2.31□□□□□ -2.04
LHX1P48742 SNAP23P1-201ENST00000433229 246 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AL161788.1-201ENST00000441805 169 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms