Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC145146.1-201ENST00000496370 254 ntBASIC1.65□□□□□ -2.15
SSR1P43307 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.65□□□□□ -2.15
SSR1P43307 AP001893.2-201ENST00000526949 202 ntBASIC1.65□□□□□ -2.15
SSR1P43307 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.65□□□□□ -2.15
SSR1P43307 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.65□□□□□ -2.15
SSR1P43307 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.65□□□□□ -2.15
SSR1P43307 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.65□□□□□ -2.15
SSR1P43307 MIR4760-201ENST00000585040 80 ntBASIC1.65□□□□□ -2.15
SSR1P43307 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSR1P43307 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSR1P43307 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SSR1P43307 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.64□□□□□ -2.15
SSR1P43307 MIR26B-201ENST00000362251 77 ntBASIC1.64□□□□□ -2.15
SSR1P43307 MIR29C-201ENST00000385231 88 ntBASIC1.64□□□□□ -2.15
SSR1P43307 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
SSR1P43307 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.64□□□□□ -2.15
SSR1P43307 AL033528.1-201ENST00000453780 140 ntBASIC1.64□□□□□ -2.15
SSR1P43307 MTCO2P6-201ENST00000463134 685 ntBASIC1.64□□□□□ -2.15
SSR1P43307 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.64□□□□□ -2.15
SSR1P43307 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
SSR1P43307 MTCO3P7-201ENST00000510008 774 ntBASIC1.64□□□□□ -2.15
SSR1P43307 RNA5SP503-201ENST00000517047 117 ntBASIC1.64□□□□□ -2.15
SSR1P43307 COPS8P3-201ENST00000526024 482 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AP005435.4-201ENST00000529514 284 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.64□□□□□ -2.15
SSR1P43307 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
SSR1P43307 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AC002044.1-201ENST00000606707 158 ntBASIC1.64□□□□□ -2.15
SSR1P43307 AC241585.2-209ENST00000638217 143 ntBASIC1.64□□□□□ -2.15
SSR1P43307 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SSR1P43307 MTND5P17-201ENST00000418405 1603 ntBASIC1.63□□□□□ -2.15
SSR1P43307 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
SSR1P43307 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
SSR1P43307 MIR454-201ENST00000390180 115 ntBASIC1.63□□□□□ -2.15
SSR1P43307 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SSR1P43307 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.63□□□□□ -2.15
SSR1P43307 SRIP3-201ENST00000413200 219 ntBASIC1.63□□□□□ -2.15
SSR1P43307 MTND4P20-201ENST00000424125 869 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.63□□□□□ -2.15
SSR1P43307 UBE2V1P4-201ENST00000425374 344 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AL031667.1-201ENST00000440222 725 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AL031274.1-201ENST00000450334 232 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.63□□□□□ -2.15
SSR1P43307 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.63□□□□□ -2.15
SSR1P43307 AC091874.1-201ENST00000511402 339 ntBASIC1.63□□□□□ -2.15
SSR1P43307 MTCO3P28-201ENST00000513351 515 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.63□□□□□ -2.15
SSR1P43307 RNU6-377P-201ENST00000515965 102 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AP000889.1-201ENST00000530968 660 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AC018630.3-201ENST00000542637 96 ntBASIC1.63□□□□□ -2.15
SSR1P43307 MIR5583-1-201ENST00000580941 59 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AL034555.1-201ENST00000604816 211 ntBASIC1.63□□□□□ -2.15
SSR1P43307 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
SSR1P43307 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.63□□□□□ -2.15
SSR1P43307 AP001506.1-201ENST00000615444 211 ntBASIC1.63□□□□□ -2.15
SSR1P43307 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
SSR1P43307 AC091931.1-201ENST00000623488 728 ntBASIC1.63□□□□□ -2.15
SSR1P43307 SNORD98-201ENST00000636377 67 ntBASIC1.63□□□□□ -2.15
SSR1P43307 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SSR1P43307 Y_RNA.201-201ENST00000364052 96 ntBASIC1.62□□□□□ -2.15
SSR1P43307 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
SSR1P43307 SNORD26-201ENST00000384147 75 ntBASIC1.62□□□□□ -2.15
SSR1P43307 RNU6-43P-201ENST00000384302 107 ntBASIC1.62□□□□□ -2.15
SSR1P43307 RNU6-456P-201ENST00000384493 107 ntBASIC1.62□□□□□ -2.15
SSR1P43307 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SSR1P43307 SNORA16.2-201ENST00000390991 127 ntBASIC1.62□□□□□ -2.15
SSR1P43307 SNORD70.1-201ENST00000391007 85 ntBASIC1.62□□□□□ -2.15
SSR1P43307 RNU6-387P-201ENST00000411331 105 ntBASIC1.62□□□□□ -2.15
SSR1P43307 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
SSR1P43307 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
SSR1P43307 AL513185.2-201ENST00000425543 193 ntBASIC1.62□□□□□ -2.15
SSR1P43307 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.62□□□□□ -2.15
SSR1P43307 AL358934.1-201ENST00000432346 324 ntBASIC1.62□□□□□ -2.15
SSR1P43307 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.62□□□□□ -2.15
SSR1P43307 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
SSR1P43307 snoU13.26-201ENST00000459452 105 ntBASIC1.62□□□□□ -2.15
SSR1P43307 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
SSR1P43307 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.62□□□□□ -2.15
SSR1P43307 MTND3P5-201ENST00000512798 333 ntBASIC1.62□□□□□ -2.15
SSR1P43307 Y_RNA.675-201ENST00000516389 149 ntBASIC1.62□□□□□ -2.15
SSR1P43307 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSR1P43307 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.62□□□□□ -2.15
SSR1P43307 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.62□□□□□ -2.15
SSR1P43307 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.62□□□□□ -2.15
SSR1P43307 TRAV32-201ENST00000553993 340 ntBASIC1.62□□□□□ -2.15
SSR1P43307 AC103996.1-201ENST00000555468 102 ntBASIC1.62□□□□□ -2.15
SSR1P43307 U1.36-201ENST00000620684 176 ntBASIC1.62□□□□□ -2.15
SSR1P43307 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.62□□□□□ -2.15
SSR1P43307 AC022513.1-201ENST00000624512 117 ntBASIC1.62□□□□□ -2.15
SSR1P43307 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.62□□□□□ -2.15
SSR1P43307 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
SSR1P43307 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSR1P43307 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSR1P43307 RNU6-1222P-201ENST00000384615 107 ntBASIC1.61□□□□□ -2.15
SSR1P43307 RNY3P10-201ENST00000384764 102 ntBASIC1.61□□□□□ -2.15
SSR1P43307 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
SSR1P43307 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
SSR1P43307 AL590135.1-201ENST00000422215 156 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms