Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 AL033519.2-201ENST00000403958 392 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 MTCO2P19-201ENST00000427513 598 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 RPS15AP10-201ENST00000432472 382 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 RNU7-167P-201ENST00000459160 62 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 AC108078.1-201ENST00000508073 725 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.93□□□□□ -2.1
PTPN6P29350 AC022616.8-201ENST00000533569 253 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 MIR5583-1-201ENST00000580941 59 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.93□□□□□ -2.1
PTPN6P29350 BNIP3P16-201ENST00000589779 534 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 APOOP1-201ENST00000604695 592 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PTPN6P29350 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PTPN6P29350 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PTPN6P29350 SNORD114-1-201ENST00000362705 72 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 RNU6-336P-201ENST00000364891 107 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 RNU6-611P-201ENST00000384276 104 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 Y_RNA.582-201ENST00000391023 95 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 DEFB108C-201ENST00000400154 252 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 Y_RNA.597-201ENST00000410463 100 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.92□□□□□ -2.1
PTPN6P29350 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
PTPN6P29350 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.92□□□□□ -2.1
PTPN6P29350 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.92□□□□□ -2.1
PTPN6P29350 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.92□□□□□ -2.1
PTPN6P29350 AL163973.1-201ENST00000484753 577 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 RNU5F-2P-201ENST00000516066 82 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 RNU6-965P-201ENST00000516721 96 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.92□□□□□ -2.1
PTPN6P29350 CYCSP27-201ENST00000527643 293 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.92□□□□□ -2.1
PTPN6P29350 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PTPN6P29350 uc_338.34-201ENST00000617467 174 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 ZNF355P-201ENST00000427301 3216 ntBASIC1.92□□□□□ -2.1
PTPN6P29350 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PTPN6P29350 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PTPN6P29350 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PTPN6P29350 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 RNU6-1119P-201ENST00000384349 108 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PTPN6P29350 RNU6-1158P-201ENST00000391167 107 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AL079342.1-201ENST00000401460 267 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AL606923.1-201ENST00000406616 190 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 RNU4-55P-201ENST00000410731 137 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.91□□□□□ -2.1
PTPN6P29350 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC073415.1-201ENST00000449240 153 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AK3P2-201ENST00000507976 429 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.91□□□□□ -2.1
PTPN6P29350 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 MTND4P7-201ENST00000523876 130 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.91□□□□□ -2.1
PTPN6P29350 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.91□□□□□ -2.1
PTPN6P29350 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.91□□□□□ -2.1
PTPN6P29350 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC103987.3-201ENST00000582071 292 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.91□□□□□ -2.1
PTPN6P29350 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 YWHAEP7-203ENST00000622054 312 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 AC241585.2-209ENST00000638217 143 ntBASIC1.91□□□□□ -2.1
PTPN6P29350 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
PTPN6P29350 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU6-1285P-201ENST00000363480 105 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU6-743P-201ENST00000364151 106 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 Y_RNA.255-201ENST00000364581 97 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU6-827P-201ENST00000365553 106 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 Y_RNA.381-201ENST00000365666 102 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTPN6P29350 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTPN6P29350 SNORD116-1-201ENST00000384335 95 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU6-692P-201ENST00000384496 107 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU2-48P-201ENST00000410694 191 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AL353193.1-201ENST00000421444 268 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AL606489.2-201ENST00000433886 234 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.9□□□□□ -2.11
PTPN6P29350 AC013470.1-201ENST00000453438 462 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.9□□□□□ -2.11
PTPN6P29350 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU7-180P-201ENST00000459240 63 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC091133.4-201ENST00000511142 308 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 MTND3P5-201ENST00000512798 333 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 COPS8P3-201ENST00000526024 482 ntBASIC1.9□□□□□ -2.11
PTPN6P29350 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms