Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TPRKBP2-201ENST00000565969 475 ntBASIC1.98□□□□□ -2.09
TOP1P11387 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
TOP1P11387 AL078605.1-201ENST00000603529 500 ntBASIC1.98□□□□□ -2.09
TOP1P11387 ELOCP5-201ENST00000604924 333 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AP001330.5-201ENST00000607176 411 ntBASIC1.98□□□□□ -2.09
TOP1P11387 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TOP1P11387 AL359880.1-201ENST00000621879 266 ntBASIC1.98□□□□□ -2.09
TOP1P11387 SNORD114-19-201ENST00000363072 75 ntBASIC1.97□□□□□ -2.09
TOP1P11387 RNU6-179P-201ENST00000363350 107 ntBASIC1.97□□□□□ -2.09
TOP1P11387 RNU6-371P-201ENST00000364283 108 ntBASIC1.97□□□□□ -2.09
TOP1P11387 RNU6-1215P-201ENST00000384441 102 ntBASIC1.97□□□□□ -2.09
TOP1P11387 Y_RNA.505-201ENST00000384489 102 ntBASIC1.97□□□□□ -2.09
TOP1P11387 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
TOP1P11387 RNU6-192P-201ENST00000391253 100 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AL591034.2-201ENST00000402839 359 ntBASIC1.97□□□□□ -2.09
TOP1P11387 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TOP1P11387 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.97□□□□□ -2.09
TOP1P11387 MTND1P18-201ENST00000448191 573 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC003071.1-201ENST00000451219 789 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 SNORD13-201ENST00000459299 104 ntBASIC1.97□□□□□ -2.09
TOP1P11387 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.97□□□□□ -2.09
TOP1P11387 MTCO3P9-201ENST00000506989 781 ntBASIC1.97□□□□□ -2.09
TOP1P11387 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TOP1P11387 RN7SKP219-201ENST00000516825 296 ntBASIC1.97□□□□□ -2.09
TOP1P11387 SNORA31.19-201ENST00000517079 126 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 AP001893.2-201ENST00000526949 202 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC104383.1-201ENST00000530297 370 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TOP1P11387 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 MTATP6P3-201ENST00000581686 676 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.97□□□□□ -2.09
TOP1P11387 AC080078.2-201ENST00000603766 501 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC126118.1-201ENST00000607744 628 ntBASIC1.97□□□□□ -2.09
TOP1P11387 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AL157786.1-207ENST00000627771 695 ntBASIC1.97□□□□□ -2.09
TOP1P11387 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP1P11387 RNU1-23P-201ENST00000363361 144 ntBASIC1.96□□□□□ -2.1
TOP1P11387 Y_RNA.372-201ENST00000365599 102 ntBASIC1.96□□□□□ -2.1
TOP1P11387 RNU6-1029P-201ENST00000384109 107 ntBASIC1.96□□□□□ -2.1
TOP1P11387 SNORA40C-201ENST00000391285 128 ntBASIC1.96□□□□□ -2.1
TOP1P11387 CISD1P1-201ENST00000393907 327 ntBASIC1.96□□□□□ -2.1
TOP1P11387 EEF1A1P40-201ENST00000412883 573 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP1P11387 AL606489.2-201ENST00000433886 234 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AL078601.1-201ENST00000444542 271 ntBASIC1.96□□□□□ -2.1
TOP1P11387 FTH1P25-201ENST00000447665 469 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.96□□□□□ -2.1
TOP1P11387 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TOP1P11387 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP1P11387 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AL356010.1-201ENST00000456364 102 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC022364.2-201ENST00000457963 554 ntBASIC1.96□□□□□ -2.1
TOP1P11387 RPS29P15-201ENST00000458329 171 ntBASIC1.96□□□□□ -2.1
TOP1P11387 RNU7-182P-201ENST00000459009 62 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC006512.1-201ENST00000468816 291 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC079382.1-201ENST00000493346 557 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC104806.1-201ENST00000508720 308 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC010493.1-201ENST00000513479 292 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP1P11387 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP1P11387 AP003034.1-201ENST00000534621 422 ntBASIC1.96□□□□□ -2.1
TOP1P11387 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.96□□□□□ -2.1
TOP1P11387 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.96□□□□□ -2.1
TOP1P11387 AC136619.2-201ENST00000563361 631 ntBASIC1.96□□□□□ -2.1
TOP1P11387 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TOP1P11387 RPL30P11-203ENST00000598995 310 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC122108.2-201ENST00000611946 526 ntBASIC1.96□□□□□ -2.1
TOP1P11387 AC139792.3-201ENST00000623525 224 ntBASIC1.96□□□□□ -2.1
TOP1P11387 RNU6-234P-201ENST00000365229 104 ntBASIC1.95□□□□□ -2.1
TOP1P11387 RNU6-190P-201ENST00000384154 102 ntBASIC1.95□□□□□ -2.1
TOP1P11387 RNU6-903P-201ENST00000391270 109 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL033519.2-201ENST00000403958 392 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AC000111.3-201ENST00000433478 193 ntBASIC1.95□□□□□ -2.1
TOP1P11387 MTND3P21-201ENST00000433774 331 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.95□□□□□ -2.1
TOP1P11387 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP1P11387 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.95□□□□□ -2.1
TOP1P11387 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP1P11387 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP1P11387 AC105417.1-201ENST00000514691 285 ntBASIC1.95□□□□□ -2.1
TOP1P11387 RNU6-586P-201ENST00000517265 104 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AC109329.1-201ENST00000518744 317 ntBASIC1.95□□□□□ -2.1
TOP1P11387 ADI1P3-201ENST00000549509 470 ntBASIC1.95□□□□□ -2.1
TOP1P11387 MIR4703-201ENST00000577728 79 ntBASIC1.95□□□□□ -2.1
TOP1P11387 MIR1273C-201ENST00000578669 77 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AC090897.2-201ENST00000581715 130 ntBASIC1.95□□□□□ -2.1
TOP1P11387 BNIP3P30-201ENST00000601184 574 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AC012507.3-201ENST00000603556 477 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL158032.1-201ENST00000605401 106 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL359547.2-201ENST00000615810 418 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
TOP1P11387 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP1P11387 AC073534.2-201ENST00000620377 381 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms