Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR15A-201ENST00000607334 83 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 AC092807.2-201ENST00000609367 243 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 AC025253.1-201ENST00000613623 543 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC4P09017 AC009248.2-201ENST00000619826 254 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 AL133216.2-202ENST00000634512 349 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 AC112487.2-201ENST00000637950 304 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC4P09017 ADAM3A-203ENST00000461344 2157 ntBASIC1.98□□□□□ -2.09
HOXC4P09017 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXC4P09017 UBE2L2-201ENST00000254302 429 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 Y_RNA.72-201ENST00000362894 103 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-1252P-201ENST00000363054 104 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-797P-201ENST00000363101 109 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-694P-201ENST00000364071 147 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-767P-201ENST00000384132 107 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-831P-201ENST00000384548 107 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 Y_RNA.529-201ENST00000384586 119 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 Y_RNA.534-201ENST00000384599 112 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 MIR1289-2-201ENST00000408360 111 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AL160275.3-201ENST00000423876 471 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC007560.1-201ENST00000426912 237 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 GPM6BP2-201ENST00000432046 144 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC4P09017 GPM6BP1-201ENST00000446387 144 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RPL7P12-201ENST00000446719 750 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC104058.1-201ENST00000448028 297 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 MTATP6P7-201ENST00000453315 681 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC080013.2-201ENST00000460866 323 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU4-49P-201ENST00000516080 140 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 RNU6-677P-201ENST00000516914 101 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 MTND4P7-201ENST00000523876 130 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 BNIP3P6-201ENST00000549284 499 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC021739.1-201ENST00000559631 174 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 FGF7P1-201ENST00000582820 288 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 BNIP3P25-201ENST00000596023 559 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC008121.1-201ENST00000603244 268 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXC4P09017 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AP003400.5-201ENST00000624827 617 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 Z99571.1-201ENST00000636677 394 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AC002543.1-201ENST00000299783 1954 ntBASIC1.97□□□□□ -2.09
HOXC4P09017 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 Y_RNA.184-201ENST00000363884 108 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-371P-201ENST00000364283 108 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-1303P-201ENST00000364841 107 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-715P-201ENST00000365204 103 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 Y_RNA.356-201ENST00000365475 113 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-1009P-201ENST00000390996 107 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 SNORD70.1-201ENST00000391007 85 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-817P-201ENST00000391083 104 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU4-46P-201ENST00000410818 138 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXC4P09017 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL592045.1-201ENST00000429867 352 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 IFNA11P-201ENST00000446352 526 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 HMGN2P10-201ENST00000448085 265 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 snoU13.23-201ENST00000458863 104 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU7-66P-201ENST00000459469 62 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-1208P-201ENST00000459588 107 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.96□□□□□ -2.1
HOXC4P09017 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HOXC4P09017 FAM206BP-201ENST00000510179 541 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU6-914P-201ENST00000516749 109 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 RNU7-30P-201ENST00000516835 62 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXC4P09017 AP005902.1-201ENST00000521358 186 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXC4P09017 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXC4P09017 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXC4P09017 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 MIR3942-201ENST00000585264 109 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AC174048.1-201ENST00000603389 144 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL138889.2-201ENST00000603883 242 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 uc_338.14-201ENST00000613162 166 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 AL359547.2-201ENST00000615810 418 ntBASIC1.96□□□□□ -2.1
HOXC4P09017 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXC4P09017 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HOXC4P09017 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXC4P09017 Y_RNA.61-201ENST00000362835 102 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 Y_RNA.142-201ENST00000363491 102 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 Y_RNA.263-201ENST00000364659 114 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 MIR578-201ENST00000384828 96 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 SNORA26.9-201ENST00000391322 122 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 RNU6-387P-201ENST00000411331 105 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXC4P09017 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXC4P09017 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXC4P09017 AL353729.1-201ENST00000425044 720 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 MTCO3P46-201ENST00000425787 232 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 IFNA20P-201ENST00000436840 528 ntBASIC1.95□□□□□ -2.1
HOXC4P09017 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXC4P09017 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms