Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDB3O75112 AP003122.5-201ENST00000527668 3766 ntBASIC2.71□□□□□ -1.98
LDB3O75112 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LDB3O75112 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.71□□□□□ -1.98
LDB3O75112 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB3O75112 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LDB3O75112 RNU1-35P-201ENST00000362782 153 ntBASIC2.7□□□□□ -1.98
LDB3O75112 Y_RNA.106-201ENST00000363189 100 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RNU6-99P-201ENST00000364721 107 ntBASIC2.7□□□□□ -1.98
LDB3O75112 Z98749.2-208ENST00000381646 500 ntBASIC2.7□□□□□ -1.98
LDB3O75112 Y_RNA.428-201ENST00000384078 102 ntBASIC2.7□□□□□ -1.98
LDB3O75112 SNORA41-201ENST00000384675 132 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RNU6-823P-201ENST00000391042 103 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
LDB3O75112 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
LDB3O75112 MIR1289-1-201ENST00000408836 144 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AL096701.2-201ENST00000416920 238 ntBASIC2.7□□□□□ -1.98
LDB3O75112 BPY2DP-201ENST00000422208 265 ntBASIC2.7□□□□□ -1.98
LDB3O75112 DPH3P2-201ENST00000422618 250 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.7□□□□□ -1.98
LDB3O75112 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RPL23AP50-201ENST00000434149 455 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB3O75112 AC011816.1-201ENST00000441346 546 ntBASIC2.7□□□□□ -1.98
LDB3O75112 HIGD1AP2-201ENST00000446367 280 ntBASIC2.7□□□□□ -1.98
LDB3O75112 PCMTD1P1-201ENST00000455560 355 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RPS29P20-201ENST00000489592 171 ntBASIC2.7□□□□□ -1.98
LDB3O75112 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.7□□□□□ -1.98
LDB3O75112 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.7□□□□□ -1.98
LDB3O75112 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB3O75112 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB3O75112 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
LDB3O75112 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.7□□□□□ -1.98
LDB3O75112 AC110491.1-201ENST00000562191 2010 ntBASIC2.69□□□□□ -1.98
LDB3O75112 RNU6-1317P-201ENST00000364582 104 ntBASIC2.69□□□□□ -1.98
LDB3O75112 RNU1-115P-201ENST00000365329 160 ntBASIC2.69□□□□□ -1.98
LDB3O75112 SNORA63.7-201ENST00000365579 123 ntBASIC2.69□□□□□ -1.98
LDB3O75112 Y_RNA.389-201ENST00000383924 113 ntBASIC2.69□□□□□ -1.98
LDB3O75112 RNU6-784P-201ENST00000384330 106 ntBASIC2.69□□□□□ -1.98
LDB3O75112 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
LDB3O75112 Y_RNA.574-201ENST00000384766 95 ntBASIC2.69□□□□□ -1.98
LDB3O75112 MIR767-201ENST00000390228 109 ntBASIC2.69□□□□□ -1.98
LDB3O75112 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB3O75112 RN7SKP58-201ENST00000411010 305 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB3O75112 AC093151.1-201ENST00000427711 313 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AC108059.2-201ENST00000434626 151 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AC244505.4-201ENST00000434905 287 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB3O75112 AC098831.1-201ENST00000440661 216 ntBASIC2.69□□□□□ -1.98
LDB3O75112 SSXP5-201ENST00000443473 287 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AL031274.1-201ENST00000450334 232 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AC112492.4-201ENST00000456549 352 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
LDB3O75112 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB3O75112 AC116655.1-201ENST00000508324 901 ntBASIC2.69□□□□□ -1.98
LDB3O75112 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB3O75112 CPDP1-201ENST00000579660 283 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
LDB3O75112 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
LDB3O75112 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LDB3O75112 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.69□□□□□ -1.98
LDB3O75112 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 Y_RNA.26-201ENST00000362539 101 ntBASIC2.68□□□□□ -1.98
LDB3O75112 Y_RNA.149-201ENST00000363558 117 ntBASIC2.68□□□□□ -1.98
LDB3O75112 RNU6-1318P-201ENST00000365389 103 ntBASIC2.68□□□□□ -1.98
LDB3O75112 SNORA18.3-201ENST00000384122 132 ntBASIC2.68□□□□□ -1.98
LDB3O75112 Y_RNA.533-201ENST00000384596 114 ntBASIC2.68□□□□□ -1.98
LDB3O75112 RNU6-1222P-201ENST00000384615 107 ntBASIC2.68□□□□□ -1.98
LDB3O75112 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
LDB3O75112 U3.37-201ENST00000408528 213 ntBASIC2.68□□□□□ -1.98
LDB3O75112 RNU2-23P-201ENST00000410545 195 ntBASIC2.68□□□□□ -1.98
LDB3O75112 RNU6-293P-201ENST00000411259 106 ntBASIC2.68□□□□□ -1.98
LDB3O75112 Z92545.1-201ENST00000411782 234 ntBASIC2.68□□□□□ -1.98
LDB3O75112 CBX3P6-201ENST00000430257 527 ntBASIC2.68□□□□□ -1.98
LDB3O75112 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB3O75112 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
LDB3O75112 RPL23AP58-201ENST00000440453 469 ntBASIC2.68□□□□□ -1.98
LDB3O75112 snoU109.2-201ENST00000459316 135 ntBASIC2.68□□□□□ -1.98
LDB3O75112 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.68□□□□□ -1.98
LDB3O75112 Y_RNA.721-201ENST00000517207 102 ntBASIC2.68□□□□□ -1.98
LDB3O75112 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LDB3O75112 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.68□□□□□ -1.98
LDB3O75112 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.68□□□□□ -1.98
LDB3O75112 AC004817.2-201ENST00000561794 651 ntBASIC2.68□□□□□ -1.98
LDB3O75112 SUB1P3-201ENST00000564581 315 ntBASIC2.68□□□□□ -1.98
LDB3O75112 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.68□□□□□ -1.98
LDB3O75112 AC008121.1-201ENST00000603244 268 ntBASIC2.68□□□□□ -1.98
LDB3O75112 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
LDB3O75112 U4.1-201ENST00000620349 87 ntBASIC2.68□□□□□ -1.98
LDB3O75112 AC002064.3-201ENST00000623448 346 ntBASIC2.68□□□□□ -1.98
LDB3O75112 SCARNA4-202ENST00000625402 129 ntBASIC2.68□□□□□ -1.98
LDB3O75112 AL606534.2-204ENST00000635008 178 ntBASIC2.68□□□□□ -1.98
LDB3O75112 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms