Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.77□□□□□ -2.29
SSNA1O43805 RBBP4P6-201ENST00000508098 202 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 MTND3P25-201ENST00000509243 135 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 RNU6-1041P-201ENST00000516254 102 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 SCARNA16.2-201ENST00000516520 172 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.77□□□□□ -2.29
SSNA1O43805 AL442163.3-201ENST00000554110 156 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.77□□□□□ -2.29
SSNA1O43805 AP005136.1-201ENST00000579765 429 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AL391646.1-201ENST00000603860 190 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AC112187.2-201ENST00000604345 283 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.77□□□□□ -2.29
SSNA1O43805 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
SSNA1O43805 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SSNA1O43805 MIR449A-201ENST00000362113 91 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 Y_RNA.97-201ENST00000363094 102 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RNU6-39P-201ENST00000384344 107 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 SNORA24.1-201ENST00000384401 135 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RNU6-1245P-201ENST00000411130 106 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RNA5SP111-201ENST00000411386 101 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 MTCO1P21-201ENST00000416634 589 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AL590135.1-201ENST00000422215 156 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC013410.2-201ENST00000422627 201 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC019205.3-201ENST00000424573 156 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC000111.3-201ENST00000433478 193 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC016700.2-201ENST00000446011 156 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC016925.1-201ENST00000458303 298 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RNU7-14P-201ENST00000459331 62 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RPS26P45-201ENST00000471748 340 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.76□□□□□ -2.29
SSNA1O43805 AC015911.1-201ENST00000495111 156 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.76□□□□□ -2.29
SSNA1O43805 AC116347.2-201ENST00000514912 523 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 RNU6-1098P-201ENST00000516772 96 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.76□□□□□ -2.29
SSNA1O43805 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.76□□□□□ -2.29
SSNA1O43805 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AC073539.2-201ENST00000597113 165 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.76□□□□□ -2.29
SSNA1O43805 AL021879.1-201ENST00000611756 288 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 AP000484.1-201ENST00000620067 1252 ntBASIC0.76□□□□□ -2.29
SSNA1O43805 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
SSNA1O43805 SNORD31B-201ENST00000364977 69 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNA5SP259-201ENST00000365541 109 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNU6-43P-201ENST00000384302 107 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNU6-809P-201ENST00000384461 107 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNA5SP201-201ENST00000410316 124 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 COX6CP10-201ENST00000416832 224 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.75□□□□□ -2.29
SSNA1O43805 USP9YP14-201ENST00000430663 563 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RPL22P17-201ENST00000438729 315 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RPL31P3-201ENST00000458430 332 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.75□□□□□ -2.29
SSNA1O43805 AC074344.1-201ENST00000512823 224 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNU6-165P-201ENST00000517170 99 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.75□□□□□ -2.29
SSNA1O43805 AP001893.2-201ENST00000526949 202 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.75□□□□□ -2.29
SSNA1O43805 ZNF519P3-201ENST00000557158 1032 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 MIR5697-201ENST00000578045 78 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 MIR5692A1-201ENST00000580523 69 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 HMGN1P30-201ENST00000589286 268 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.75□□□□□ -2.29
SSNA1O43805 BNIP3P40-201ENST00000596017 556 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 AL392048.1-201ENST00000613946 534 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
SSNA1O43805 RNU5E-10P-201ENST00000363506 118 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 RNU6-692P-201ENST00000384496 107 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 RNU6-1000P-201ENST00000391066 106 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 RNU2-3P-201ENST00000410144 191 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.74□□□□□ -2.29
SSNA1O43805 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.74□□□□□ -2.29
SSNA1O43805 CYCSP49-201ENST00000420810 319 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AC010099.3-201ENST00000423896 409 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.74□□□□□ -2.29
SSNA1O43805 AC244670.1-201ENST00000436879 112 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.74□□□□□ -2.29
SSNA1O43805 AC069257.2-201ENST00000441819 155 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AC087343.1-201ENST00000477341 475 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.74□□□□□ -2.29
SSNA1O43805 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.74□□□□□ -2.29
SSNA1O43805 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.74□□□□□ -2.29
SSNA1O43805 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.74□□□□□ -2.29
SSNA1O43805 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.74□□□□□ -2.29
SSNA1O43805 MIR4709-201ENST00000577272 72 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
SSNA1O43805 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.74□□□□□ -2.29
SSNA1O43805 AC008521.1-201ENST00000587471 187 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 CTHRC1P1-201ENST00000605383 469 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AC126177.8-201ENST00000618339 1015 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AC136475.10-201ENST00000620253 385 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 AL359740.1-201ENST00000624340 592 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 Z69720.2-201ENST00000624755 279 ntBASIC0.74□□□□□ -2.29
SSNA1O43805 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SSNA1O43805 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.73□□□□□ -2.29
SSNA1O43805 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
SSNA1O43805 CYCSP33-201ENST00000414485 327 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms