Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SCARNA15.1-201ENST00000516384 125 ntBASIC2.75□□□□□ -1.97
LDB2O43679 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
LDB2O43679 SNRPGP18-201ENST00000553000 214 ntBASIC2.75□□□□□ -1.97
LDB2O43679 ELOCP29-201ENST00000588193 334 ntBASIC2.75□□□□□ -1.97
LDB2O43679 BNIP3P16-201ENST00000589779 534 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC022432.1-201ENST00000595739 310 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB2O43679 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.75□□□□□ -1.97
LDB2O43679 uc_338.22-201ENST00000622722 187 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC090617.7-201ENST00000623952 126 ntBASIC2.75□□□□□ -1.97
LDB2O43679 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LDB2O43679 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.75□□□□□ -1.97
LDB2O43679 AC091564.4-201ENST00000533934 2194 ntBASIC2.75□□□□□ -1.97
LDB2O43679 SNORD116-20-201ENST00000384529 92 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
LDB2O43679 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB2O43679 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB2O43679 AL591043.1-201ENST00000432461 424 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB2O43679 AL137792.2-201ENST00000443484 235 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AL118496.2-201ENST00000448300 230 ntBASIC2.74□□□□□ -1.97
LDB2O43679 RPS29P12-201ENST00000460178 152 ntBASIC2.74□□□□□ -1.97
LDB2O43679 RPS29P27-201ENST00000463711 170 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AC090096.1-201ENST00000489168 390 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB2O43679 SMURF2P1-201ENST00000514992 481 ntBASIC2.74□□□□□ -1.97
LDB2O43679 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
LDB2O43679 Y_RNA.711-201ENST00000516993 102 ntBASIC2.74□□□□□ -1.97
LDB2O43679 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
LDB2O43679 SNORA31.21-201ENST00000517180 77 ntBASIC2.74□□□□□ -1.97
LDB2O43679 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AC022634.1-201ENST00000520765 532 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LDB2O43679 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
LDB2O43679 CR383656.8-201ENST00000549046 145 ntBASIC2.74□□□□□ -1.97
LDB2O43679 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB2O43679 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
LDB2O43679 MIR4513-201ENST00000581077 86 ntBASIC2.74□□□□□ -1.97
LDB2O43679 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LDB2O43679 MIR4273-201ENST00000582824 84 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AC006023.1-201ENST00000603944 259 ntBASIC2.74□□□□□ -1.97
LDB2O43679 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.74□□□□□ -1.97
LDB2O43679 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB2O43679 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.74□□□□□ -1.97
LDB2O43679 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB2O43679 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LDB2O43679 RNU6-858P-201ENST00000362436 107 ntBASIC2.73□□□□□ -1.97
LDB2O43679 RNU6-227P-201ENST00000362865 103 ntBASIC2.73□□□□□ -1.97
LDB2O43679 Y_RNA.132-201ENST00000363421 102 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AL512633.1-201ENST00000399931 655 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AC023141.4-201ENST00000412031 328 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB2O43679 BX276092.3-201ENST00000424182 230 ntBASIC2.73□□□□□ -1.97
LDB2O43679 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB2O43679 MTND3P9-201ENST00000429526 346 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AC105272.1-201ENST00000438604 198 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AL161651.1-201ENST00000440882 223 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AC011816.1-201ENST00000441346 546 ntBASIC2.73□□□□□ -1.97
LDB2O43679 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB2O43679 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB2O43679 MED28P2-201ENST00000475771 317 ntBASIC2.73□□□□□ -1.97
LDB2O43679 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB2O43679 RNU6-470P-201ENST00000515954 104 ntBASIC2.73□□□□□ -1.97
LDB2O43679 RNA5SP76-201ENST00000516277 87 ntBASIC2.73□□□□□ -1.97
LDB2O43679 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB2O43679 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.73□□□□□ -1.97
LDB2O43679 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB2O43679 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB2O43679 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.73□□□□□ -1.97
LDB2O43679 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
LDB2O43679 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB2O43679 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.72□□□□□ -1.97
LDB2O43679 RNU6-490P-201ENST00000362985 107 ntBASIC2.72□□□□□ -1.97
LDB2O43679 Y_RNA.202-201ENST00000364083 110 ntBASIC2.72□□□□□ -1.97
LDB2O43679 RNA5SP139-201ENST00000364340 117 ntBASIC2.72□□□□□ -1.97
LDB2O43679 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LDB2O43679 Y_RNA.463-201ENST00000384271 102 ntBASIC2.72□□□□□ -1.97
LDB2O43679 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LDB2O43679 RNA5SP21-201ENST00000410917 96 ntBASIC2.72□□□□□ -1.97
LDB2O43679 AP000275.1-201ENST00000411943 390 ntBASIC2.72□□□□□ -1.97
LDB2O43679 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB2O43679 AC243428.1-201ENST00000421099 264 ntBASIC2.72□□□□□ -1.97
LDB2O43679 EIF4EP2-201ENST00000422816 654 ntBASIC2.72□□□□□ -1.97
LDB2O43679 RPL23AP50-201ENST00000434149 455 ntBASIC2.72□□□□□ -1.97
LDB2O43679 RPL23AP58-201ENST00000440453 469 ntBASIC2.72□□□□□ -1.97
LDB2O43679 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB2O43679 MTND5P30-201ENST00000452896 1731 ntBASIC2.72□□□□□ -1.97
LDB2O43679 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
LDB2O43679 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.72□□□□□ -1.97
LDB2O43679 AC022493.2-201ENST00000506122 481 ntBASIC2.72□□□□□ -1.97
LDB2O43679 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB2O43679 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB2O43679 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
LDB2O43679 SNORD19.2-201ENST00000516978 73 ntBASIC2.72□□□□□ -1.97
LDB2O43679 ACA59.2-201ENST00000517061 156 ntBASIC2.72□□□□□ -1.97
LDB2O43679 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB2O43679 AC007536.1-201ENST00000533382 349 ntBASIC2.72□□□□□ -1.97
LDB2O43679 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB2O43679 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms