Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
PHF1O43189 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.16□□□□□ -2.06
PHF1O43189 MTND1P17-201ENST00000448961 204 ntBASIC2.16□□□□□ -2.06
PHF1O43189 MTCO1P29-201ENST00000496868 288 ntBASIC2.16□□□□□ -2.06
PHF1O43189 RPS27P27-201ENST00000498779 255 ntBASIC2.16□□□□□ -2.06
PHF1O43189 MTCYBP40-201ENST00000509390 1135 ntBASIC2.16□□□□□ -2.06
PHF1O43189 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.16□□□□□ -2.06
PHF1O43189 AC109329.2-201ENST00000519658 482 ntBASIC2.16□□□□□ -2.06
PHF1O43189 AP004607.1-201ENST00000524456 203 ntBASIC2.16□□□□□ -2.06
PHF1O43189 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.16□□□□□ -2.06
PHF1O43189 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PHF1O43189 FO624990.1-201ENST00000636373 85 ntBASIC2.16□□□□□ -2.06
PHF1O43189 U4.7-201ENST00000638126 106 ntBASIC2.16□□□□□ -2.06
PHF1O43189 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PHF1O43189 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
PHF1O43189 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PHF1O43189 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
PHF1O43189 Y_RNA.142-201ENST00000363491 102 ntBASIC2.15□□□□□ -2.07
PHF1O43189 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-1329P-201ENST00000365664 107 ntBASIC2.15□□□□□ -2.07
PHF1O43189 SNORD116-11-201ENST00000383882 92 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-1013P-201ENST00000384180 107 ntBASIC2.15□□□□□ -2.07
PHF1O43189 Y_RNA.474-201ENST00000384341 102 ntBASIC2.15□□□□□ -2.07
PHF1O43189 MIR548K-201ENST00000408406 116 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RN7SKP223-201ENST00000410582 62 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
PHF1O43189 NCOR1P3-201ENST00000420479 303 ntBASIC2.15□□□□□ -2.07
PHF1O43189 PGBD4P6-201ENST00000421501 610 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.15□□□□□ -2.07
PHF1O43189 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.15□□□□□ -2.07
PHF1O43189 HMGN2P3-201ENST00000433603 273 ntBASIC2.15□□□□□ -2.07
PHF1O43189 HMGN2P5-201ENST00000436882 273 ntBASIC2.15□□□□□ -2.07
PHF1O43189 SNRPEP8-201ENST00000442866 260 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC104389.3-201ENST00000445629 235 ntBASIC2.15□□□□□ -2.07
PHF1O43189 HIGD1AP2-201ENST00000446367 280 ntBASIC2.15□□□□□ -2.07
PHF1O43189 BTF3P15-201ENST00000455606 336 ntBASIC2.15□□□□□ -2.07
PHF1O43189 MTND1P11-201ENST00000456661 876 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RPL23AP45-201ENST00000476406 468 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC090096.1-201ENST00000489168 390 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC103851.1-201ENST00000506833 274 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.15□□□□□ -2.07
PHF1O43189 AC008526.1-201ENST00000509149 338 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-566P-201ENST00000516790 107 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-323P-201ENST00000521915 107 ntBASIC2.15□□□□□ -2.07
PHF1O43189 CKS1BP7-201ENST00000522230 235 ntBASIC2.15□□□□□ -2.07
PHF1O43189 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.15□□□□□ -2.07
PHF1O43189 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.15□□□□□ -2.07
PHF1O43189 FGF7P1-201ENST00000582820 288 ntBASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-85P-201ENST00000605989 107 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AL132765.2-201ENST00000610812 351 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AC093913.1-201ENST00000614178 329 ntBASIC2.15□□□□□ -2.07
PHF1O43189 AL353997.5-201ENST00000618886 171 ntBASIC2.15□□□□□ -2.07
PHF1O43189 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.15□□□□□ -2.07
PHF1O43189 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PHF1O43189 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PHF1O43189 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PHF1O43189 RNU6-78P-201ENST00000362897 107 ntBASIC2.14□□□□□ -2.07
PHF1O43189 RNU6-1252P-201ENST00000363054 104 ntBASIC2.14□□□□□ -2.07
PHF1O43189 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PHF1O43189 RPS29P13-201ENST00000402041 169 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC096649.2-201ENST00000416186 393 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.14□□□□□ -2.07
PHF1O43189 UBE2V1P4-201ENST00000425374 344 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.14□□□□□ -2.07
PHF1O43189 AL365400.1-201ENST00000431854 640 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC011816.1-201ENST00000441346 546 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC107626.1-201ENST00000471084 183 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.14□□□□□ -2.07
PHF1O43189 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.14□□□□□ -2.07
PHF1O43189 AC132942.1-201ENST00000486753 483 ntBASIC2.14□□□□□ -2.07
PHF1O43189 RNU6-277P-201ENST00000516272 106 ntBASIC2.14□□□□□ -2.07
PHF1O43189 SNORA43.2-201ENST00000516652 128 ntBASIC2.14□□□□□ -2.07
PHF1O43189 RNA5SP454-201ENST00000517231 127 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC109479.2-201ENST00000517842 174 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AC105029.1-201ENST00000520250 669 ntBASIC2.14□□□□□ -2.07
PHF1O43189 AP005639.2-201ENST00000527592 928 ntBASIC2.14□□□□□ -2.07
PHF1O43189 RAB11AP2-201ENST00000545905 639 ntBASIC2.14□□□□□ -2.07
PHF1O43189 CR383656.8-201ENST00000549046 145 ntBASIC2.14□□□□□ -2.07
PHF1O43189 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.14□□□□□ -2.07
PHF1O43189 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.14□□□□□ -2.07
PHF1O43189 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.14□□□□□ -2.07
PHF1O43189 MIR4658-201ENST00000584344 65 ntBASIC2.14□□□□□ -2.07
PHF1O43189 C8orf59P2-201ENST00000603441 271 ntBASIC2.14□□□□□ -2.07
PHF1O43189 ELOCP5-201ENST00000604924 333 ntBASIC2.14□□□□□ -2.07
PHF1O43189 TPTEP1-208ENST00000636884 213 ntBASIC2.14□□□□□ -2.07
PHF1O43189 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PHF1O43189 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
PHF1O43189 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
PHF1O43189 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.14□□□□□ -2.07
PHF1O43189 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PHF1O43189 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PHF1O43189 ZNF271P-202ENST00000465539 1970 ntBASIC2.13□□□□□ -2.07
PHF1O43189 RNU6-37P-201ENST00000362692 107 ntBASIC2.13□□□□□ -2.07
PHF1O43189 RNU6-11P-201ENST00000364234 107 ntBASIC2.13□□□□□ -2.07
PHF1O43189 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
PHF1O43189 Y_RNA.338-201ENST00000365320 114 ntBASIC2.13□□□□□ -2.07
PHF1O43189 RNU6-25P-201ENST00000383873 107 ntBASIC2.13□□□□□ -2.07
PHF1O43189 RNU6-1-201ENST00000383898 107 ntBASIC2.13□□□□□ -2.07
PHF1O43189 RNU6-48P-201ENST00000384161 107 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms