Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
TO15178 AC046134.1-201ENST00000514454 666 ntBASIC2.42□□□□□ -2.02
TO15178 AP005902.1-201ENST00000521358 186 ntBASIC2.42□□□□□ -2.02
TO15178 AC115990.1-201ENST00000526957 301 ntBASIC2.42□□□□□ -2.02
TO15178 MIR4319-201ENST00000577285 85 ntBASIC2.42□□□□□ -2.02
TO15178 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TO15178 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.41□□□□□ -2.02
TO15178 MTND3P8-201ENST00000412909 339 ntBASIC2.41□□□□□ -2.02
TO15178 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.41□□□□□ -2.02
TO15178 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.41□□□□□ -2.02
TO15178 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.41□□□□□ -2.02
TO15178 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.41□□□□□ -2.02
TO15178 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.41□□□□□ -2.02
TO15178 snoU13.14-201ENST00000459372 104 ntBASIC2.41□□□□□ -2.02
TO15178 AP001486.1-201ENST00000463339 476 ntBASIC2.41□□□□□ -2.02
TO15178 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.41□□□□□ -2.02
TO15178 AC116353.2-201ENST00000505332 712 ntBASIC2.41□□□□□ -2.02
TO15178 RNU2-53P-201ENST00000516257 147 ntBASIC2.41□□□□□ -2.02
TO15178 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.41□□□□□ -2.02
TO15178 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.41□□□□□ -2.02
TO15178 AC091135.1-201ENST00000585943 307 ntBASIC2.41□□□□□ -2.02
TO15178 AP001836.1-201ENST00000604675 523 ntBASIC2.41□□□□□ -2.02
TO15178 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
TO15178 AC245884.12-201ENST00000615364 59 ntBASIC2.41□□□□□ -2.02
TO15178 AL159153.1-201ENST00000619688 317 ntBASIC2.41□□□□□ -2.02
TO15178 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.41□□□□□ -2.02
TO15178 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TO15178 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
TO15178 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TO15178 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TO15178 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TO15178 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-655P-201ENST00000362858 107 ntBASIC2.4□□□□□ -2.03
TO15178 SNORA5B-201ENST00000363786 132 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-1141P-201ENST00000364520 107 ntBASIC2.4□□□□□ -2.03
TO15178 Y_RNA.279-201ENST00000364763 95 ntBASIC2.4□□□□□ -2.03
TO15178 Y_RNA.301-201ENST00000364990 103 ntBASIC2.4□□□□□ -2.03
TO15178 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-43P-201ENST00000384302 107 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-933P-201ENST00000384424 107 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-95P-201ENST00000384697 107 ntBASIC2.4□□□□□ -2.03
TO15178 RNU2-52P-201ENST00000410680 190 ntBASIC2.4□□□□□ -2.03
TO15178 AL030996.1-201ENST00000411430 235 ntBASIC2.4□□□□□ -2.03
TO15178 AP000275.1-201ENST00000411943 390 ntBASIC2.4□□□□□ -2.03
TO15178 AC138393.2-201ENST00000414742 246 ntBASIC2.4□□□□□ -2.03
TO15178 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.4□□□□□ -2.03
TO15178 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.4□□□□□ -2.03
TO15178 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.4□□□□□ -2.03
TO15178 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.4□□□□□ -2.03
TO15178 AC092473.1-201ENST00000441098 221 ntBASIC2.4□□□□□ -2.03
TO15178 MTND3P10-201ENST00000450967 341 ntBASIC2.4□□□□□ -2.03
TO15178 PPP1R2P5-201ENST00000457256 603 ntBASIC2.4□□□□□ -2.03
TO15178 AL049873.1-201ENST00000480540 376 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-566P-201ENST00000516790 107 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-612P-201ENST00000516909 102 ntBASIC2.4□□□□□ -2.03
TO15178 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
TO15178 AC118273.2-201ENST00000532092 465 ntBASIC2.4□□□□□ -2.03
TO15178 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
TO15178 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.4□□□□□ -2.03
TO15178 AC026464.5-201ENST00000562497 722 ntBASIC2.4□□□□□ -2.03
TO15178 MIR4742-201ENST00000581069 85 ntBASIC2.4□□□□□ -2.03
TO15178 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TO15178 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
TO15178 AC092608.2-201ENST00000624427 218 ntBASIC2.4□□□□□ -2.03
TO15178 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
TO15178 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TO15178 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TO15178 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TO15178 RNU6-227P-201ENST00000362865 103 ntBASIC2.39□□□□□ -2.03
TO15178 RNU6-1210P-201ENST00000363775 107 ntBASIC2.39□□□□□ -2.03
TO15178 RNU6-1317P-201ENST00000364582 104 ntBASIC2.39□□□□□ -2.03
TO15178 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TO15178 BTF3L4P2-201ENST00000392798 346 ntBASIC2.39□□□□□ -2.03
TO15178 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TO15178 RN7SKP32-201ENST00000410167 303 ntBASIC2.39□□□□□ -2.03
TO15178 RNU6-325P-201ENST00000411132 105 ntBASIC2.39□□□□□ -2.03
TO15178 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
TO15178 AL139396.1-201ENST00000421137 167 ntBASIC2.39□□□□□ -2.03
TO15178 AC008267.5-201ENST00000424928 265 ntBASIC2.39□□□□□ -2.03
TO15178 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.39□□□□□ -2.03
TO15178 IFNA11P-201ENST00000446352 526 ntBASIC2.39□□□□□ -2.03
TO15178 AL031659.1-201ENST00000447075 539 ntBASIC2.39□□□□□ -2.03
TO15178 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
TO15178 AL109933.2-201ENST00000452651 260 ntBASIC2.39□□□□□ -2.03
TO15178 AC130509.1-201ENST00000464158 433 ntBASIC2.39□□□□□ -2.03
TO15178 SNRPGP7-201ENST00000469016 106 ntBASIC2.39□□□□□ -2.03
TO15178 RPL30P1-201ENST00000488676 339 ntBASIC2.39□□□□□ -2.03
TO15178 AC140059.1-201ENST00000489238 361 ntBASIC2.39□□□□□ -2.03
TO15178 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.39□□□□□ -2.03
TO15178 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.39□□□□□ -2.03
TO15178 RPL39P5-202ENST00000512505 151 ntBASIC2.39□□□□□ -2.03
TO15178 RNU6-1088P-201ENST00000516850 104 ntBASIC2.39□□□□□ -2.03
TO15178 SNORA20.3-201ENST00000516880 132 ntBASIC2.39□□□□□ -2.03
TO15178 RNA5SP454-201ENST00000517231 127 ntBASIC2.39□□□□□ -2.03
TO15178 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.39□□□□□ -2.03
TO15178 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.39□□□□□ -2.03
TO15178 AC060766.3-201ENST00000591442 263 ntBASIC2.39□□□□□ -2.03
TO15178 RPL30P11-203ENST00000598995 310 ntBASIC2.39□□□□□ -2.03
TO15178 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.39□□□□□ -2.03
TO15178 MIR5739-201ENST00000619803 80 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms