Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 SNORA70.22-201ENST00000517160 124 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AC022616.8-201ENST00000533569 253 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AC021231.3-201ENST00000558497 370 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 MIR3921-201ENST00000577308 85 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 SNORA77B-201ENST00000578179 125 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AL365434.2-201ENST00000607979 234 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AL133445.2-201ENST00000611191 527 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 MIR644A-201ENST00000385262 94 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 CBX3P9-201ENST00000402326 552 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 MTCO2P31-201ENST00000402702 684 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 RNA5SP100-201ENST00000410903 110 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 RNA5SP59-201ENST00000410922 110 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AC092573.2-201ENST00000434546 243 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 TRBV8-1-201ENST00000481590 279 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 SNORA31.4-201ENST00000516049 129 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AC022523.2-201ENST00000561045 150 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 MIR3167-201ENST00000579623 85 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AL357080.1-201ENST00000617394 239 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.27□□□□□ -2.45
COL6A5A8TX70 AC016909.1-201ENST00000415916 166 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 MTND1P9-201ENST00000453775 944 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC091860.1-201ENST00000505723 432 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 BNIP3P39-201ENST00000601077 554 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC007349.4-201ENST00000608114 532 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC009237.15-201ENST00000610252 501 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC092634.7-201ENST00000621022 103 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC040168.1-201ENST00000623594 991 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AL589872.1-201ENST00000426602 288 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 DAP3P1-201ENST00000441522 278 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 RPS3AP17-201ENST00000472594 777 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC025423.2-201ENST00000537570 439 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 BPTFP1-201ENST00000579209 492 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC060771.1-201ENST00000582031 164 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 MIR4499-201ENST00000584834 69 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 BNIP3P27-201ENST00000599991 412 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 AC024257.5-201ENST00000612739 531 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
COL6A5A8TX70 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 SNORD114-25-201ENST00000363742 72 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 BX664727.1-201ENST00000416024 466 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A5A8TX70 MTND1P22-201ENST00000510572 951 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC092325.1-201ENST00000566449 554 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 MIR8063-201ENST00000621930 81 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AL390237.1-201ENST00000404226 1415 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 RNA5SP258-201ENST00000362750 119 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 RNY1P8-201ENST00000383970 114 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 RNU6-284P-201ENST00000411105 106 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC233266.1-201ENST00000454518 96 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL6A5A8TX70 HMGN1P12-201ENST00000499125 195 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC023632.1-201ENST00000518463 375 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC026616.1-201ENST00000523157 525 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC027104.1-201ENST00000563702 681 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC112187.2-201ENST00000604345 283 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 Z82243.1-201ENST00000609432 473 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC006157.1-201ENST00000611750 366 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC242852.1-201ENST00000612151 96 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 AC244015.1-201ENST00000622301 99 ntBASIC-0.29□□□□□ -2.46
COL6A5A8TX70 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COL6A5A8TX70 RNU6-884P-201ENST00000363889 107 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC078974.1-201ENST00000411597 223 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 RAD1P2-201ENST00000446414 663 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 RNU6-274P-201ENST00000459566 107 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 LARP1BP2-201ENST00000486594 519 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC105185.1-201ENST00000518705 535 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL6A5A8TX70 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.3□□□□□ -2.46
COL6A5A8TX70 AC068792.1-201ENST00000621354 417 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms