Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC009541.1-201ENST00000438279 2662 ntBASIC2.92□□□□□ -1.94
CGB1A6NKQ9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CGB1A6NKQ9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RNU6-222P-201ENST00000362438 107 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 Y_RNA.44-201ENST00000362676 108 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 SNORD115-32-201ENST00000364079 82 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 SNORA70.2-201ENST00000364506 135 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RNU6-102P-201ENST00000384485 104 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 SNORA48.8-201ENST00000391324 134 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RAB9AP3-201ENST00000412737 573 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC017079.2-201ENST00000416102 485 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC245291.1-201ENST00000419501 328 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC016700.2-201ENST00000446011 156 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RAB9AP1-201ENST00000449393 573 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AL353705.4-201ENST00000449661 238 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 NUTF2P7-201ENST00000453086 375 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RPL7P49-201ENST00000471402 708 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RPL23AP75-201ENST00000491601 451 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 RNU1-103P-201ENST00000516502 125 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 MRPS36P4-201ENST00000534436 298 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC136624.4-201ENST00000573044 370 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 MIR4782-201ENST00000577987 79 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC010928.2-201ENST00000588017 287 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 U6.99-201ENST00000637524 83 ntBASIC2.91□□□□□ -1.94
CGB1A6NKQ9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.91□□□□□ -1.94
CGB1A6NKQ9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CGB1A6NKQ9 AC110491.1-201ENST00000562191 2010 ntBASIC2.9□□□□□ -1.94
CGB1A6NKQ9 ZNF826P-207ENST00000622273 1910 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.76-201ENST00000362931 109 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RNU6-527P-201ENST00000363425 104 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RNU6-326P-201ENST00000365480 107 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RNU6-1286P-201ENST00000383871 107 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RNU6-843P-201ENST00000384454 104 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.504-201ENST00000384481 104 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 MIR548I2-201ENST00000408348 149 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 U3.37-201ENST00000408528 213 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 BPY2DP-201ENST00000422208 265 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AC004975.1-201ENST00000428733 208 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RPS15AP7-201ENST00000439294 405 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AC098831.1-201ENST00000440661 216 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 TPT1P12-201ENST00000448968 492 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AL133162.1-201ENST00000463228 453 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 COX6CP14-201ENST00000469580 174 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RPL23AP49-201ENST00000492925 468 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AC107393.1-201ENST00000512403 346 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RNU6-255P-201ENST00000516957 105 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AP004607.1-201ENST00000524456 203 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AC087441.2-201ENST00000529141 262 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 MIR3186-201ENST00000577404 85 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 MIR5187-201ENST00000583479 76 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 SNORD113-5-201ENST00000607261 78 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AP000553.6-201ENST00000641242 118 ntBASIC2.9□□□□□ -1.95
CGB1A6NKQ9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CGB1A6NKQ9 AP003122.5-201ENST00000527668 3766 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RNU6-879P-201ENST00000364328 108 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 MIR153-2-201ENST00000385225 87 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RNU1-139P-201ENST00000391307 165 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RNA5SP31-201ENST00000411144 127 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AC006483.1-201ENST00000487308 313 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RPS27AP10-201ENST00000496103 208 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 RNU2-31P-201ENST00000516954 155 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AC007224.1-201ENST00000564410 144 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 MIR4697-201ENST00000582977 78 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 HMGN2P15-201ENST00000585707 270 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AC107294.3-201ENST00000609211 526 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AC241585.2-209ENST00000638217 143 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 AC132825.6-201ENST00000638861 357 ntBASIC2.89□□□□□ -1.95
CGB1A6NKQ9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms