Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-43P-201ENST00000384302 107 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 RPS29P13-201ENST00000402041 169 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 MTND1P2-201ENST00000430604 821 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 MTCO2P3-201ENST00000442543 421 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1037P-201ENST00000459571 107 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 RPL9P9-202ENST00000466501 579 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AL121594.1-201ENST00000475906 575 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 TRBVA-201ENST00000498804 316 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC025465.4-201ENST00000513422 638 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 RNU4-49P-201ENST00000516080 140 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 RNU6-256P-201ENST00000516747 97 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AF235103.2-201ENST00000525753 346 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 HSPE1P4-201ENST00000550617 308 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC009127.3-201ENST00000570531 403 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 MIR3672-201ENST00000584290 82 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 BNIP3P16-201ENST00000589779 534 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AL670379.2-201ENST00000604983 252 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AL138963.2-201ENST00000605137 226 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 BNIP3P10-201ENST00000605360 577 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 AC006504.8-201ENST00000621046 635 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 CASC19-280ENST00000642102 1351 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1222P-201ENST00000384615 107 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNU6-876P-201ENST00000391295 104 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNA5SP118-201ENST00000410385 109 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNU6-325P-201ENST00000411132 105 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 MTND1P23-201ENST00000416931 372 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 Z82205.1-201ENST00000428456 297 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNU7-187P-201ENST00000458985 68 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RPS27P27-201ENST00000498779 255 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RPL23AP94-201ENST00000512518 302 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 RNU6-612P-201ENST00000516909 102 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC243972.3-201ENST00000539655 198 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 PRELID2P1-201ENST00000552837 301 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC027176.1-201ENST00000560204 514 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC091135.1-201ENST00000585943 307 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AL713866.2-201ENST00000603579 219 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC063943.3-201ENST00000615562 356 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AC009033.1-201ENST00000624279 431 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
NKX6-3A6NJ46 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1210P-201ENST00000363775 107 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.504-201ENST00000384481 104 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 MIR521-1-201ENST00000384902 87 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AL356776.1-201ENST00000406574 447 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AIMP1P2-201ENST00000425294 312 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 SNAP23P1-201ENST00000433229 246 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 EEF1B2P7-201ENST00000451177 676 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 FGF7P6-202ENST00000451282 293 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AL353752.1-201ENST00000454946 260 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 RNU6-358P-201ENST00000516564 75 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC007375.1-201ENST00000554513 578 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC060780.3-201ENST00000589464 80 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AP001836.1-201ENST00000604675 523 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AL355297.2-201ENST00000604792 129 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 MIR5739-201ENST00000619803 80 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC009248.2-201ENST00000619826 254 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC080100.1-201ENST00000624239 5356 ntBASIC2.12□□□□□ -2.07
NKX6-3A6NJ46 AC009541.1-201ENST00000438279 2662 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms