Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC078809.1-201ENST00000427601 140 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC008155.2-201ENST00000464337 397 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AP004217.1-201ENST00000480579 346 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 RN7SL633P-201ENST00000488974 297 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC104564.1-201ENST00000493028 407 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC010653.1-201ENST00000571108 881 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC104581.2-201ENST00000572227 430 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 AC092447.9-201ENST00000603395 144 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 7SK.7-201ENST00000603504 247 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHA13Q9Y5I0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
PCDHA13Q9Y5I0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 RNU1-33P-201ENST00000364249 162 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 RNU6-142P-201ENST00000384019 107 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 MIR625-201ENST00000385047 85 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC007098.1-201ENST00000420122 367 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 RPL21P10-201ENST00000463521 490 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 AC002543.1-201ENST00000299783 1954 ntBASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA13Q9Y5I0 MTND5P1-201ENST00000445440 1375 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC233981.2-201ENST00000611524 1614 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNU6-799P-201ENST00000363567 107 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNA5SP72-201ENST00000364442 117 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNU4-9P-201ENST00000364951 139 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 CYCSP48-201ENST00000417124 323 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC004383.1-201ENST00000438135 289 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC016632.1-201ENST00000503994 196 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 RNU4-77P-201ENST00000516692 156 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC109329.1-201ENST00000518744 317 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC144568.1-201ENST00000520139 137 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC004584.2-201ENST00000570407 410 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC096772.1-201ENST00000609146 564 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 uc_338.14-201ENST00000613162 166 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 MIR8058-201ENST00000615737 89 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AL138825.1-201ENST00000618587 192 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC007792.1-201ENST00000623023 402 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AL606534.2-204ENST00000635008 178 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AC091564.4-201ENST00000533934 2194 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 AP000560.1-201ENST00000624150 1937 ntBASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA13Q9Y5I0 MIR208A-201ENST00000362287 71 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 RNA5SP387-201ENST00000364226 106 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 RNU6-968P-201ENST00000384076 107 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 SNORA12.2-201ENST00000391040 156 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 RNA5SP494-201ENST00000410653 129 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 AL160004.2-201ENST00000432935 350 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 OSTCP8-201ENST00000445117 448 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 RPL39P29-201ENST00000447779 157 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 AC015911.1-201ENST00000495111 156 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 AC105758.1-201ENST00000506038 399 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 AC091874.1-201ENST00000511402 339 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 RNU7-175P-201ENST00000515915 61 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.25□□□□□ -1.89
PCDHA13Q9Y5I0 MRPS36P4-201ENST00000534436 298 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms